RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 SLC12A9Q9BXP2 914 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 PRR13Q9NZ81 148 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 SRRDQ9UH36 339 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 DBR1Q9UK59 544 aaKnown RBP5.01□□□□□ -1.61
CDKN3-201ENST00000216414 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 PMF1-BGLAPU3KQ54 211 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 TACR1P25103 407 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 ZNF165P49910 485 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 ZXDAP98168 799 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 ZNF827Q17R98 1081 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 TDRD10Q5VZ19 366 aaKnown RBP5□□□□□ -1.61
CDKN3-201ENST00000216414 LIPIQ6XZB0 460 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 REXO1Q8N1G1 1221 aaKnown RBP5□□□□□ -1.61
CDKN3-201ENST00000216414 FNIP1Q8TF40 1166 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 SLC9A7Q96T83 725 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 ADAMTS1Q9UHI8 967 aa5□□□□□ -1.61
CDKN3-201ENST00000216414 MEIS3P2A8K0S8 358 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 C9IYK1 514 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 F8W031 263 aaPredicted RBP4.99□□□□□ -1.61
CDKN3-201ENST00000216414 H0Y8X5 98 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 SRGAP3O43295 1099 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 KRTAP1-1Q07627 177 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 NOL9Q5SY16 702 aaKnown RBP4.99□□□□□ -1.61
CDKN3-201ENST00000216414 ZFYVE27Q5T4F4 411 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 USP48Q86UV5 1035 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 NKD1Q969G9 470 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 DHRS1Q96LJ7 313 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 SUCOQ9UBS9 1254 aaKnown RBP4.99□□□□□ -1.61
CDKN3-201ENST00000216414 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
CDKN3-201ENST00000216414 SHOXO15266 292 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 NCAM1P13591 858 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 ATF2P15336 505 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 FBLN1P23142 703 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 MC3RP41968 323 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 PRR5P85299 388 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 DCAF15Q66K64 600 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 CYP2R1Q6VVX0 501 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 HS2ST1Q7LGA3 356 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 SAPCD2Q86UD0 394 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 RGS22Q8NE09 1264 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 ZNF526Q8TF50 670 aaPredicted RBP4.98□□□□□ -1.61
CDKN3-201ENST00000216414 ALG3Q92685 438 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 BRF1Q92994 677 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 PDLIM7Q9NR12 457 aa4.98□□□□□ -1.61
CDKN3-201ENST00000216414 OVOL3O00110 214 aa4.97□□□□□ -1.61
CDKN3-201ENST00000216414 FGF10O15520 208 aaPredicted RBP4.97□□□□□ -1.61
CDKN3-201ENST00000216414 CNR2P34972 360 aa4.97□□□□□ -1.61
CDKN3-201ENST00000216414 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
CDKN3-201ENST00000216414 DDX1Q92499 740 aaKnown RBP4.97□□□□□ -1.61
CDKN3-201ENST00000216414 RNF38Q9H0F5 515 aa4.97□□□□□ -1.61
CDKN3-201ENST00000216414 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
CDKN3-201ENST00000216414 TBC1D8O95759 1140 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 TP53P04637 393 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-201ENST00000216414 CD3EP07766 207 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 ACRP10323 421 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 GJA9P57773 515 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 HTRA3P83110 453 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 SMARCC1Q92922 1105 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-201ENST00000216414 FCRL3Q96P31 734 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-201ENST00000216414 RXFP1Q9HBX9 757 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 GP6Q9HCN6 339 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 TIMELESSQ9UNS1 1208 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 DUSP10Q9Y6W6 482 aa4.96□□□□□ -1.62
CDKN3-201ENST00000216414 SH3D21A4FU49 640 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 FSHBP01225 129 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 ASGR2P07307 311 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 IFNGR1P15260 489 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 L1CAMP32004 1257 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 MAGEA10P43363 369 aaPredicted RBP4.95□□□□□ -1.62
CDKN3-201ENST00000216414 PMS1P54277 932 aaKnown RBP4.95□□□□□ -1.62
CDKN3-201ENST00000216414 CORO7P57737 925 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 ZNF445P59923 1031 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 PPFIBP1Q86W92 1011 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 CARFQ8N187 725 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 FIBCD1Q8N539 461 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 PTCHD1Q96NR3 888 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 NT5C1AQ9BXI3 368 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 SRRTQ9BXP5 876 aaKnown RBP4.95□□□□□ -1.62
CDKN3-201ENST00000216414 BCAS3Q9H6U6 928 aa4.95□□□□□ -1.62
CDKN3-201ENST00000216414 DLX2Q07687 328 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-201ENST00000216414 AXDND1Q5T1B0 1012 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-201ENST00000216414 INTS3Q68E01 1043 aaKnown RBP4.94□□□□□ -1.62
CDKN3-201ENST00000216414 CABP7Q86V35 215 aa4.94□□□□□ -1.62
CDKN3-201ENST00000216414 KIAA0825Q8IV33 1275 aa4.94□□□□□ -1.62
CDKN3-201ENST00000216414 SLC16A11Q8NCK7 471 aa4.94□□□□□ -1.62
CDKN3-201ENST00000216414 ZDHHC15Q96MV8 337 aa4.94□□□□□ -1.62
CDKN3-201ENST00000216414 NOL6Q9H6R4 1146 aaKnown RBP4.94□□□□□ -1.62
CDKN3-201ENST00000216414 SF3B6Q9Y3B4 125 aaKnown RBP4.94□□□□□ -1.62
CDKN3-201ENST00000216414 FHOD1Q9Y613 1164 aa4.94□□□□□ -1.62
CDKN3-201ENST00000216414 NOBOXO60393 691 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 ITGA4P13612 1032 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 CD247P20963 164 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 PMLP29590 882 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 HMGA2P52926 109 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 ADAM17P78536 824 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 POU4F1Q01851 419 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 B3GNT8Q7Z7M8 397 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 SMARCC2Q8TAQ2 1214 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms