RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Phldb2Q8K1N2 1249 aa31.2■■■□□ 2.59
Ldb1-208ENSMUST00000185355 Krt79Q8VED5 531 aa31.2■■■□□ 2.59
Ldb1-208ENSMUST00000185355 Fam76aQ922G2 307 aa31.2■■■□□ 2.59
Ldb1-208ENSMUST00000185355 SmapQ9R0P4 181 aaKnown RBP31.2■■■□□ 2.59
Ldb1-208ENSMUST00000185355 Ddx23D3Z0M9 819 aaKnown RBP31.2■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Nol4P60954 483 aa31.2■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Ttbk2Q3UVR3 1243 aa31.2■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Exoc1Q8R3S6 894 aa31.2■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Tube1Q9D6T1 475 aa31.2■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Zfand4D3Z3C6 739 aa31.19■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Sap30bpQ02614 308 aa31.19■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Arhgef6Q8K4I3 771 aa31.19■■■□□ 2.58
Ldb1-208ENSMUST00000185355 ChmQ9QXG2 665 aa31.19■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Pip4k2aO70172 405 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Mybl2P48972 704 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Ssrp1Q08943 708 aaKnown RBP31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Ercc6lQ8BHK9 1240 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Egfl6Q9JJZ5 550 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Prl2c5Q9JLV9 222 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Gm5580A0A0N4SVP8 411 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 AaasP58742 546 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Ccdc102aQ3TMW1 549 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Nom1Q3UFM5 854 aaKnown RBP31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Tcp11l2Q8K1H7 517 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Ptf1aQ9QX98 324 aa31.18■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Lrrc32G3XA59 663 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Sdccag8Q80UF4 717 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Rab3il1Q8VDV3 383 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Spata18Q0P557 537 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Kctd1Q5M956 257 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Vps18Q8R307 973 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Tomm22Q9CPQ3 142 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Git2Q9JLQ2 708 aa31.17■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Foxn3Q499D0 457 aa31.16■■■□□ 2.58
Ldb1-208ENSMUST00000185355 HyiQ8R1F5 277 aa31.16■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Dhx30Q99PU8 1217 aaKnown RBP31.16■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Rhobtb3Q9CTN4 611 aa31.16■■■□□ 2.58
Ldb1-208ENSMUST00000185355 EhhadhQ9DBM2 718 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Dock2Q8C3J5 1828 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Dnm2P39054 870 aaKnown RBP31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Acot10Q32MW3 439 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Oxr1Q4KMM3 866 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Insm1Q63ZV0 521 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Arhgef19Q8BWA8 802 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Plekhg6Q8R0J1 787 aa31.15■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Zfp646Q6NV66 1788 aa31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Rad23aP54726 363 aa31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Uri1Q3TLD5 531 aa31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Fam196bQ6GQV1 535 aa31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 PigsQ6PD26 555 aaKnown RBP31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Nap1l4Q78ZA7 375 aaKnown RBP31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Tacc2Q9JJG0 1149 aa31.14■■■□□ 2.58
Ldb1-208ENSMUST00000185355 Gm10378F6XQQ1 160 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Tpp1O89023 562 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Plcb1Q9Z1B3 1216 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 PfasQ5SUR0 1337 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Riox2Q8CD15 465 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Ifih1Q8R5F7 1025 aa31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Tor1aip1Q921T2 595 aaKnown RBP31.13■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Ugt1a8D3Z748 530 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Ugt1a10E9PXN7 530 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Cacnb3P54285 484 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Slc9a2Q3ZAS0 814 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Fam13bQ8K2H3 851 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Chrna2Q91X60 512 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Mis18aQ9CZJ6 204 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Ccnt1Q9QWV9 724 aaKnown RBP31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Tigd5Q499M4 642 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Spag5Q7TME2 1165 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 CutaQ9CQ89 177 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Apopt1Q9CQW7 192 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Serpinb12Q9D7P9 423 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Sertad1Q9JL10 236 aa31.12■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Nme9A0A1L1SUL6 329 aa31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Trim25Q61510 634 aaKnown RBP31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Mrps31Q61733 384 aaKnown RBP31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Cracr2bQ80ZJ8 394 aa31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Scfd1Q8BRF7 639 aaKnown RBP31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 PaoxQ8C0L6 504 aa31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Gpcpd1Q8C0L9 675 aa31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Col23a1Q8K4G2 532 aa31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 AdnpQ9Z103 1108 aaKnown RBP31.11■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Lbhd1A0A087WPA0 259 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Slc27a3O88561 667 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Nedd1P33215 660 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Cdc25aP48964 514 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Maats1Q8BRC6 783 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Klhl10Q9D5V2 608 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 ArcQ9WV31 396 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Scgb2b19J3QM75 112 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Abcd1P48410 736 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Mcm6P97311 821 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Bbs9Q811G0 885 aa31.1■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Cnbd1B1AWM0 430 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Brip1Q5SXJ3 1174 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Akap4Q60662 849 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Mindy1Q76LS9 468 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Armc6Q8BNU0 468 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Tada3Q8R0L9 432 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Krtap5-3Q9D226 196 aa31.09■■■□□ 2.57
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms