RNA–Protein interactions for RNA: ENSMUST00000164916.7

Ccdc58-203, Transcript of Coiled-coil domain-containing protein 58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc58, Length 1,096 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-203ENSMUST00000164916 Cul5Q9D5V5 780 aa20.18■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Lama2Q60675 3118 aaKnown RBP20.18■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Dhx8A2A4P0 1244 aaKnown RBP20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Nedd1P33215 660 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Ppfia3P60469 1194 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Brd9Q3UQU0 596 aaKnown RBP20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Gm1587Q3UT80 123 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Srrm1Q52KI8 946 aaKnown RBP20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 PRAG1Q571I4 1179 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Eif3j2Q66JS6 263 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 ShbQ6PD21 503 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Fam205cQ80YD3 371 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Slitrk3Q810B9 980 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Trib2Q8K4K3 343 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Lrrc2Q8VDB8 371 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Havcr2Q8VIM0 281 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Tob2Q9JM55 345 aa20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Twf2Q9Z0P5 349 aaKnown RBP20.17■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Dennd4aE9Q8V6 1869 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 LtkP08923 888 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 FanccP50652 591 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Atp6v1dP57746 247 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Esyt1Q3U7R1 1092 aaKnown RBP20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Rgl1Q60695 768 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Lrrc56Q8K375 552 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 CerkQ8K4Q7 531 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Tesk2Q8VCT9 570 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Pidd1Q9ERV7 915 aa20.16■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Ms4a4aA0A087WRT7 236 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Ldlrad1D3YYZ1 218 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Gm9857F7CXR1 130 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Vwa3bJ9JI28 736 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Cyp2c37P56654 490 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Adamts10P58459 1104 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Muc1Q02496 630 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Jakmip3Q5DTN8 844 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Smarcc2Q6PDG5 1213 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Cyp2c54Q6XVG2 490 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Gprc5cQ8K3J9 440 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Cyp2c50Q91X77 490 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Fkbp1bQ9Z2I2 108 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Cntnap2Q9CPW0 1332 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 Sall1Q9ER74 1322 aa20.15■□□□□ 0.82
Ccdc58-203ENSMUST00000164916 SktA2AQ25 1946 aaKnown RBP20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 SpibO35906 267 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 NfkbieO54910 364 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Cyp2c39P56656 490 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Eepd1Q3TGW2 569 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Limch1Q3UH68 1057 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Trappc3lQ4KL14 181 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Ddx19aQ61655 478 aaKnown RBP20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 U2af1l4Q8BGJ9 220 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Tsr2Q8C8T8 191 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Ubxn8Q9QZ49 277 aa20.14■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Elmsan1E9Q2I4 1089 aaKnown RBP20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Magea4F2Z493 315 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 ArxO35085 564 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Trdmt1O55055 415 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Gna11P21278 359 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Bach1P97302 739 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Nlrx1Q3TL44 975 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Hoxa13Q62424 386 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Zbtb7bQ64321 544 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Dcaf8Q8N7N5 591 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Sgpl1Q8R0X7 568 aa20.13■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Fyb2A2A995 729 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Pdzrn4E9PUZ9 1014 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Zbtb21E9Q444 1094 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Eef2kO08796 724 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Meis2P97367 477 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Mars2Q499X9 586 aaKnown RBP20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Slc27a1Q60714 646 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Mknk2Q8CDB0 459 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Mrpl58Q8R035 206 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Anapc4Q91W96 807 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Bicd2Q921C5 820 aa20.12■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Ttc6G3UYY4 1857 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Gcnt4E9Q649 455 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Cyp3a25O09158 503 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Anp32aO35381 247 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Pgk2P09041 417 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Fads2p1Q0VAX3 487 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Pla2g4eQ50L42 875 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Tnpo1Q8BFY9 898 aaKnown RBP20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Osbpl2Q8BX94 484 aa20.11■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Rgs9O54828 675 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Pik3r1P26450 724 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Tmem63bQ3TWI9 832 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Cdkn2aipQ8BI72 563 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Dnaaf2Q8BPI1 814 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Acat1Q8QZT1 424 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Dis3Q9CSH3 958 aaKnown RBP20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Snx29Q9D3S3 818 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Q9DAQ4 598 aa20.1■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 RptorQ8K4Q0 1335 aa20.09■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 AW822073A0A0N4SUK1 652 aa20.09■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 FosP01101 380 aa20.09■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Igf2bp2Q5SF07 592 aaKnown RBP20.09■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Ddx4Q61496 702 aa20.09■□□□□ 0.81
Ccdc58-203ENSMUST00000164916 Kctd3Q8BFX3 815 aa20.09■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms