RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 NrkQ9R0G8 1455 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Nrg3O35181 713 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 MafgO54790 162 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Krt26Q3TRJ4 462 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Olfm5Q8BU90 496 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Adprhl2Q8CG72 370 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Kat14Q8CID0 779 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ccdc77Q9CZH8 489 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 ItkQ03526 625 aa19.91■□□□□ 0.78
Trim71-201ENSMUST00000111816 Dars2Q8BIP0 653 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Armcx6Q8K3A6 301 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gm7995L7N2E4 160 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Rbbp8Q80YR6 893 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ifit2Q64112 472 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Nek11Q8C0Q4 628 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Trpc5Q9QX29 975 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Acnat2Q8BGG9 420 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ppp4r4Q8C0Y0 875 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 DiabloQ9JIQ3 237 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Tbc1d9bQ5SVR0 1263 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ifit1bl2Q3U687 466 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Trim38Q5SZ99 471 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Atp5dQ9D3D9 168 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 ParvbQ9ES46 365 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Cyth3O08967 399 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Gnl1P36916 607 aa19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Trmt10cQ3UFY8 414 aaKnown RBP19.9■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ncapd3Q6ZQK0 1506 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Myl3P09542 204 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Man1a2P39098 641 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Otub1Q7TQI3 271 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Fam180aQ8BR21 173 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ndufa13Q9ERS2 144 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Nlrx1Q3TL44 975 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 RubcnQ80U62 956 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Eid1Q9DCR4 169 aa19.89■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ccdc144bE9PVZ3 520 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Myo1eE9Q634 1107 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Slc17a8Q8BFU8 601 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ubap1Q8BH48 502 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccnt1Q9QWV9 724 aaKnown RBP19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Surf1P09925 306 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccdc85bQ6PDY0 202 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dctn3Q9Z0Y1 186 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Parp3Q3ULW8 533 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Elf1Q60775 612 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Herc4Q6PAV2 1057 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Cd209bQ8CJ91 325 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Champ1Q8K327 802 aaKnown RBP19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Hdac11Q91WA3 347 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Fam135bQ9DAI6 1403 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 Haus3Q8QZX2 570 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 SdsQ8VBT2 327 aa19.89■□□□□ 0.77
Trim71-201ENSMUST00000111816 YwhagP61982 247 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Med21Q9CQ39 144 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 CutaQ9CQ89 177 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Lrp2bpQ9D4C6 346 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ttll7A4Q9F0 912 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Rab20P35295 233 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Bfsp2Q6NVD9 416 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Klhl12Q8BZM0 568 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccdc87Q8CDL9 855 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tubb1A2AQ07 451 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Rbm12b2Q66JV4 834 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ano5Q75UR0 904 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dnajc3Q91YW3 504 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tnni3P48787 211 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Myo1fP70248 1099 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 YarsQ91WQ3 528 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Washc5Q8C2E7 1159 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Lsm14bQ8CGC4 385 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ola1Q9CZ30 396 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ak2Q9WTP6 239 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Sgk1Q9WVC6 431 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Xrcc5P27641 732 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 PpargP37238 505 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Rbm41Q8JZV4 413 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 CgasQ8C6L5 507 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 XpotQ9CRT8 963 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Fam135aQ6NS59 1506 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Kdm5aQ3UXZ9 1690 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gm1141B9EJU1 475 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dph5Q9CWQ0 281 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dgcr8Q9EQM6 773 aa19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 QkiQ9QYS9 341 aaKnown RBP19.88■□□□□ 0.77
Trim71-201ENSMUST00000111816 HiraQ61666 1015 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Phf21aQ6ZPK0 659 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Abtb2Q7TQI7 1024 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Sept1P42209 366 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Adcy2Q80TL1 1090 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dr1Q91WV0 176 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tex12Q9CR81 123 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Myh3P13541 1940 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Kifc3O35231 824 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Epas1P97481 874 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Itih1Q61702 907 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 CntrobQ8CB62 887 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Haus8Q99L00 373 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Kif1cO35071 1100 aaKnown RBP19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tti2Q8BGV4 512 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms