RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Nek1P51954 1203 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Anks1aP59672 1150 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Atp11aP98197 1187 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Trappc10Q3TLI0 1259 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nxf2Q4ZGD8 691 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Glra4Q61603 456 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Eif2b5Q8CHW4 717 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Arpc5lQ9D898 153 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nup188Q6ZQH8 1759 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tex13cD3YU32 604 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Taf4bG5E8Z2 855 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 EgfrQ01279 1210 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Klhdc9Q3USL1 350 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Eme2Q56A04 373 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 TfrcQ62351 763 aaKnown RBP12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Hdac4Q6NZM9 1076 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Frmd3Q8BHD4 595 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tmem87aQ8BXN9 555 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tmem221Q8K071 230 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 WaslQ91YD9 501 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Scrn1Q9CZC8 414 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cwc15Q9JHS9 229 aaKnown RBP12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 BdnfP21237 249 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Clk1P22518 483 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Frat1P70339 274 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Rtel1Q0VGM9 1203 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ap5z1Q3U829 807 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nell2Q61220 819 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Rps6ka6Q7TPS0 764 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Dlg1Q811D0 905 aaKnown RBP12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Sept14Q9DA97 430 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nek3Q9R0A5 511 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Lamb1P02469 1786 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 TicrrQ8BQ33 1889 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ess2O70279 479 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Lilrb3P97484 841 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ankrd40Q5SUE8 363 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 LRWD1Q8BUI3 648 aaKnown RBP12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Dnm3Q8BZ98 863 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pspc1Q8R326 523 aaKnown RBP12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Galntl5Q9D4M9 431 aa12.68□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Akr1c19G3X9Y6 323 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Diaph1O08808 1255 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Kif1cO35071 1100 aaKnown RBP12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 NeblQ0II04 452 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 MyrflQ3UN70 904 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Acbd5Q5XG73 508 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mns1Q61884 491 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Atp2b4Q6Q477 1205 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gpr101Q80T62 511 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Asnsd1Q8BFS9 627 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mei4Q8BRM6 389 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Taf6lQ8R2K4 616 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mtmr4Q91XS1 1190 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gnl2Q99LH1 728 aaKnown RBP12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mtfr1lQ9CWE0 289 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Zbed3Q9D0L1 228 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Adam7O35227 789 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Copb2O55029 905 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Aco1P28271 889 aaKnown RBP12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ccbe1Q3MI99 408 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Grm4Q68EF4 912 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ppfia2Q8BSS9 1257 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tomm22Q9CPQ3 142 aa12.67□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Lbhd1A0A087WPA0 259 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Sap30bpQ02614 308 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Oxr1Q4KMM3 866 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Enox1Q8BHR2 643 aaKnown RBP12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tmem259Q8CIV2 574 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ppp1r11Q8K1L5 131 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Krt82Q99M74 516 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Zkscan5Q9Z1D8 819 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 LdhaP06151 332 aaKnown RBP12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 PRAG1Q571I4 1179 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cdc37Q61081 379 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Rhpn1Q61085 643 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nr6a1Q64249 495 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 PrimpolQ6P1E7 537 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cep135Q6P5D4 1140 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Onecut3Q8K557 490 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Znf622Q91VY9 476 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ddx27Q921N6 760 aaKnown RBP12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Brms1Q99N20 246 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Zranb2Q9R020 330 aaKnown RBP12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ambra1A2AH22 1300 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 CluhQ5SW19 1315 aa12.66□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gm7356A0A087WSA6 508 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Zfp853A0A1D5RM95 733 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 A0A1W2P6Q8 802 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gm9048A0A1W2P7H4 802 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 A0A1W2P7Z8 802 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gm9046A0A1W2P855 802 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Apol7aB2RT54 418 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Csf1rP09581 977 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tagap1P0CAX8 505 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mex3cQ05A36 652 aaKnown RBP12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 PsdQ5DTT2 1024 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 CrkQ64010 304 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 GnptabQ69ZN6 1235 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mpp4Q6P7F1 635 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms