RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Nos1Q9Z0J4 1429 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 DgkiD3YWQ0 1071 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Actn4P57780 912 aaKnown RBP16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Ccdc84Q4VA36 332 aaKnown RBP16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Snx14Q8BHY8 964 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Gbp9Q8BTS3 619 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Xbp1O35426 267 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Wdr44Q6NVE8 915 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Clic6Q8BHB9 596 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Anks1bQ8BIZ1 1259 aa16.11■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Gm5936A2BG95 728 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Gm5640A3KG49 728 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Lonrf2B2RT44 518 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Axin2O88566 840 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Atp1b3P97370 278 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 SpertQ32MG2 446 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Nxf2Q4ZGD8 691 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 LrmpQ60664 539 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Ankrd2Q9WV06 328 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 DohhA0A1Y7VJ29 135 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Erp44Q9D1Q6 406 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Zfp174B9EJW5 407 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Polr2fP61219 127 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Tfdp1Q08639 410 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 1700013D24RikQ0P521 120 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Rps6ka5Q8C050 863 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Rasgrf1P27671 1262 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Gm4981Q3ULJ8 291 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Srrm1Q52KI8 946 aaKnown RBP16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 WaplQ65Z40 1200 aaKnown RBP16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Krt39Q6IFX4 482 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Nxf7Q80SZ6 620 aaKnown RBP16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Vmn1r199Q8R280 367 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 AacsQ9D2R0 672 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Sdr42e1Q9D665 394 aa16.1■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Tnip3A0A1D5RMN0 279 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Krt36B1AQ75 473 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Pde4aO89084 844 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 XlrP05531 208 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Tmod1P49813 359 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Luc7l3Q5SUF2 432 aaKnown RBP16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Znf428Q8C1M2 176 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Mrps22Q9CXW2 359 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Tfap4Q9JIZ5 338 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Samsn1P57725 372 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Pcif1P59114 706 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Sval3Q76I99 144 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Daam2Q80U19 1115 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Lrrc8cQ8R502 803 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 MefvQ9JJ26 767 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 IdeQ9JHR7 1019 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Yeats2Q3TUF7 1407 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Cyp3a57D3YYZ0 503 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Eef1bO70251 225 aaKnown RBP16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Ighmbp2P40694 993 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Osbpl1aQ91XL9 950 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Prpf3Q922U1 683 aaKnown RBP16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 TbcbQ9D1E6 244 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Trmt112Q9DCG9 125 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Gdf11Q9Z1W4 405 aa16.09■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 P4hbP09103 509 aaKnown RBP16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Ccdc160Q3UYG1 323 aa16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Cdc37Q61081 379 aa16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Ovgp1Q62010 721 aa16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Rab11fip4Q8BQP8 635 aa16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Rabep2Q91WG2 554 aa16.08■□□□□ 0.17
Pcdh20-201ENSMUST00000061628 Nr2f2P43135 414 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Calr3Q9D9Q6 380 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Rwdd2aQ9D9S3 292 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Lmo7E9PYF4 1699 aaKnown RBP16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 DnttP09838 530 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 TxkP42682 527 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Gpr182P43142 395 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Bach1P97302 739 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Ttll1Q91V51 423 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Kdm8Q9CXT6 414 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Plekha5E9Q6H8 1269 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 4933406M09RikG3XA12 479 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Art2aP17981 287 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Ctdspl2Q8BG15 465 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Sap130Q8BIH0 1057 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Ppp4r1Q8K2V1 951 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Rims1Q99NE5 1463 aa16.08■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Serpinb6eI7HJI3 429 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Gja8P28236 440 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Zc3h18Q0P678 948 aaKnown RBP16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Ckap2Q3V1H1 664 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Ttll4Q80UG8 1193 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Q80ZQ3 298 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Hps6Q8BLY7 805 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Csgalnact2Q8C1F4 542 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Abcb6Q9DC29 842 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Stk39Q9Z1W9 556 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 AlcamQ61490 583 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Pcdhb12Q91Y07 789 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Fam81bA0A140LI28 432 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Atp8b1Q148W0 1251 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Trmt10cQ3UFY8 414 aaKnown RBP16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 AmphQ7TQF7 686 aa16.07■□□□□ 0.16
Pcdh20-201ENSMUST00000061628 Dnajc5bQ9CQ94 199 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms