RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Eif4g1Q6NZJ6 1600 aaKnown RBP17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tshz1Q5DTH5 1084 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ncoa7Q6DFV7 943 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tbc1d1Q60949 1255 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Lrriq4A6H6A4 596 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm7995L7N2E4 160 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Lmnb2P21619 596 aaKnown RBP17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Dnm3Q8BZ98 863 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Kat14Q8CID0 779 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Clic4Q9QYB1 253 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Fam47cQ14BE7 430 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Anapc5Q8BTZ4 740 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Naa16Q9DBB4 864 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Itga6Q61739 1091 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Snx19Q6P4T1 997 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 E330017A01RikQ8BU47 192 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tada3Q8R0L9 432 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Prkab2Q6PAM0 271 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 SybuQ8BHS8 665 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trim32Q8CH72 655 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Uap1Q91YN5 522 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc5a4bQ91ZP4 660 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Adi1Q99JT9 179 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Sugt1Q9CX34 336 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Q3TTJ4 293 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Dhx37Q6NZL1 1150 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 GlyctkQ8QZY2 523 aa17.03■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Exoc7O35250 697 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Mug1P28665 1476 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Rtel1Q0VGM9 1203 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 YarsQ91WQ3 528 aaKnown RBP17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ankrd26Q811D2 1581 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Hmgb2P30681 210 aaKnown RBP17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Mfap3Q922T2 349 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 XlrP05531 208 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc12a1P55014 1095 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Syne3Q4FZC9 975 aa17.02■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Zfp94E9Q6Y4 486 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Clcn6O35454 870 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Casp8O89110 480 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Armc2Q3URY6 854 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ccdc169Q8BXX9 214 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 RabggtaQ9JHK4 567 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ttc27Q8CD92 847 aa17.02■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ccnyl1D3YUJ3 367 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nova2D3YVV7 556 aaKnown RBP17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Znf532Q6NXK2 1036 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 OcrlQ6NVF0 900 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Bbs9Q811G0 885 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 1700109H08RikQ9D9C0 210 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Copb1Q9JIF7 953 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Csrnp1P59054 583 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Lrch1P62046 709 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Fkbp3Q62446 224 aaKnown RBP17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Psmd2Q8VDM4 908 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ola1Q9CZ30 396 aaKnown RBP17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 GsnP13020 780 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Tcp11Q01755 566 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Supt6hQ62383 1726 aaKnown RBP17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Cops6O88545 324 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Thumpd3P97770 505 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dhx38Q80X98 1228 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dach2Q925Q8 634 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Fyb2A2A995 729 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rapgef5Q8C0Q9 814 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rasgrf1P27671 1262 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 AsphQ8BSY0 741 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 IdeQ9JHR7 1019 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm14025A2AP89 1413 aa17.01■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Caskin1Q6P9K8 1431 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ttll7A4Q9F0 912 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Myl1P05977 188 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Madcam1Q61826 405 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Sun1Q9D666 913 aaKnown RBP17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Myo1cQ9WTI7 1063 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 H2afzP0C0S6 128 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 H2afvQ3THW5 128 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Zfp449Q8CB76 518 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 AmotQ8VHG2 1126 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 NonoQ99K48 473 aaKnown RBP17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pik3c2gO70167 1506 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pdcd2P46718 343 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 VrtnQ3SYK4 740 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rnf207Q3V3A7 635 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ccdc78D3Z5T1 437 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Pfdn6Q03958 127 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Rbm12b2Q66JV4 834 aaKnown RBP17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Thoc1Q8R3N6 657 aaKnown RBP17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Txndc9Q9CQ79 226 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Dnm2P39054 870 aaKnown RBP17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Stk36Q69ZM6 1316 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Coq7P97478 217 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Large2Q5XPT3 690 aa17■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Gm5580A0A0N4SVP8 411 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 1700006A11RikB9EHI3 544 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nr1i2O54915 431 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Ftl1P29391 183 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 ScinQ60604 715 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Nde1Q9CZA6 344 aa16.99■□□□□ 0.31
Ubr3-201ENSMUST00000055758 Copg1Q9QZE5 874 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms