RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 NpcdF8VQB8 469 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pip4k2aO70172 405 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 IntuQ059U7 942 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Plbd2Q3TCN2 594 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ppp1r1bQ60829 194 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc148Q6P5U8 527 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tspan18Q80WR1 248 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 D130040H23RikQ8BII3 405 aa9.17□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Frmd7A2AD83 703 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 MarcksP26645 309 aaKnown RBP9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc157Q5SPX1 718 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Maip1Q8BHE8 291 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Gga3Q8BMI3 718 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ctage5Q8R311 779 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ubac1Q8VDI7 409 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Prpf3Q922U1 683 aaKnown RBP9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 RpainQ9CWY9 219 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Sgpp1Q9JI99 430 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Stat2Q9WVL2 923 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 MetP16056 1379 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Nedd9O35177 833 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Cops6O88545 324 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Wnt7aP24383 349 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 ClgnP52194 611 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Q3TYL0 343 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rufy1Q8BIJ7 712 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Spice1Q8C804 860 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc80Q8R2G6 949 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Usp15Q8R5H1 981 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Msantd4Q91YU3 345 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 LpxnQ99N69 386 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 CutaQ9CQ89 177 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rrp15Q9CYX7 281 aaKnown RBP9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tnip1Q9WUU8 647 aa9.16□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Gm5934D3Z4U6 212 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Speer2E9Q9U2 264 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Capza3P70190 299 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Phactr4Q501J7 694 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tmem63cQ8CBX0 802 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Mylk2Q8VCR8 613 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Peg12Q9WVA7 283 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Gm17615E9Q9P2 165 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Trim34bJ3QNR8 485 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 TbcaP48428 108 aaKnown RBP9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Meis3P97368 378 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 PcQ05920 1178 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Gspt2Q149F3 632 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Clul1Q3ZRW6 464 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rexo4Q6PAQ4 432 aaKnown RBP9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Txndc16Q7TN22 820 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Aggf1Q7TN31 711 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 PolnQ7TQ07 864 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc181Q80ZU5 509 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Znrd1-asQ8R0E5 213 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pold4Q9CWP8 107 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 PigoQ9JJI6 1093 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tob2Q9JM55 345 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ubxn8Q9QZ49 277 aa9.15□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Serpina16D3Z660 418 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 E9QMW4 1145 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Speer4dL7N216 212 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 MthfslL7N466 203 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cd37Q61470 281 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Secisbp2lQ6A098 1086 aaKnown RBP9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 WhrnQ80VW5 918 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cyp4f39Q8BGU0 532 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 AopepQ8BXQ6 817 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Znf131Q8K3J5 619 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Plekho1Q9JIY0 408 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 FliiQ9JJ28 1271 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Trp53inp1Q9QXE4 239 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tiam2Q6ZPF3 1715 aa9.15□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myh13B1AR69 1938 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm4340L7N2C4 268 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nck2O55033 380 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Smg7Q5RJH6 1138 aaKnown RBP9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Krit1Q6S5J6 736 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Olfm5Q8BU90 496 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mmgt1Q8K273 131 aaKnown RBP9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Shtn1Q8K2Q9 631 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Get4Q9D1H7 327 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Wdr64Q9D565 1086 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rab27aQ9ERI2 221 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Noa1Q9JJG9 693 aaKnown RBP9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Coro1cQ9WUM4 474 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Zfpm1O35615 995 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Il27raO70394 623 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Sec23aQ01405 765 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 RalgdsQ03385 852 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Trappc10Q3TLI0 1259 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Serpinb6dQ3UWK8 375 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PnocQ64387 187 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pram1Q6BCL1 675 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Hirip3Q8BLH7 601 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ccdc122Q8BVN0 290 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Setdb2Q8C267 713 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Slain2Q8CI08 581 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Eva1bQ8K2Y3 164 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Eps8l1Q8R5F8 716 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ndufb9Q9CQJ8 179 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms