RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Vcpip1Q8CDG3 1220 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dph6Q9CQ28 267 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Plcb1Q9Z1B3 1216 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dip2bQ3UH60 1574 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Prss40A6H6T1 365 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 P4hbP09103 509 aaKnown RBP12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ercc5P35689 1170 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gad1P48318 593 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Kiaa1328Q6NZK5 612 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Spata16Q8C636 571 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Tldc1Q8K0P3 455 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Galnt15Q9D2N8 638 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Myo1hQ9D6A1 958 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 PigoQ9JJI6 1093 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Zfp408H7BX78 710 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rcor2Q8C796 523 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 HdlbpQ8VDJ3 1268 aaKnown RBP12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Q8VDP2 222 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Krt79Q8VED5 531 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 RereQ80TZ9 1558 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Actn4P57780 912 aaKnown RBP12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Yipf3Q3UDR8 347 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Pls1Q3V0K9 630 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Zbed4Q80WQ9 1168 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Armcx3Q8BHS6 379 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gpr108Q91WD0 569 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Sipa1l1Q8C0T5 1782 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Nova2D3YVV7 556 aaKnown RBP12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Zc3h12cQ5DTV4 884 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Hdac4Q6NZM9 1076 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Q91WD4 421 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gm4307E9PZY4 289 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gm4312K9J7E2 289 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Klhl20Q8VCK5 604 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 4930550L24RikQ99PA7 320 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Efhd1Q9D4J1 240 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rwdd2aQ9D9S3 292 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Actn2Q9JI91 894 aa12.51□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Slc9a1Q61165 820 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ehbp1Q69ZW3 1231 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Herc4Q6PAV2 1057 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Q8BWG4 1187 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Usp33Q8R5K2 909 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dph5Q9CWQ0 281 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ddx47Q9CWX9 455 aaKnown RBP12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Syce1Q9D495 329 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ndst4Q9EQW8 872 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Eme2Q56A04 373 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Antxr2Q6DFX2 487 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Micall1Q8BGT6 870 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Haus2Q9CQS9 234 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ppil4Q9CXG3 492 aaKnown RBP12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ppfibp2O35711 882 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rnpc3Q3UZ01 514 aaKnown RBP12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ccpg1Q640L3 753 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 TnrQ8BYI9 1358 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Klra1P20937 262 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ano9P86044 747 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 DSCC1Q14AI0 399 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Serpinb1cQ5SV42 375 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Prpf3Q922U1 683 aaKnown RBP12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ccdc89Q9DA73 370 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Sept3Q9Z1S5 350 aa12.5□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Psmd14O35593 310 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 BcrQ6PAJ1 1270 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ankrd24Q80VM7 985 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Vipas39Q8BGQ1 491 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Glrx3Q9CQM9 337 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ubxn8Q9QZ49 277 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Cacna2d3Q9Z1L5 1091 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Serpinc1P32261 465 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Spata5Q3UMC0 893 aaKnown RBP12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Elf1Q60775 612 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Lrrcc1Q69ZB0 1026 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Baiap3Q80TT2 1134 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Hs2st1Q8R3H7 356 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Mcur1Q9CXD6 340 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dynll2Q9D0M5 89 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 MefvQ9JJ26 767 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 PltpP55065 493 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Eef1dP57776 281 aaKnown RBP12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Polr2fP61219 127 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Atp8a1P70704 1164 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Esco1Q69Z69 843 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 KaznQ69ZS8 779 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Stk38lQ7TSE6 464 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dcaf5Q80T85 946 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ushbp1Q8R370 680 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 MlxiplQ99MZ3 864 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Armc2Q3URY6 854 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Znf827Q505G8 1078 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Bola2Q8BGS2 86 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Zfp446Q8C9M8 523 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dnajc28Q8VCE1 385 aa12.49□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ifnar1P33896 590 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Fam207aP58468 219 aaKnown RBP12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ckap2Q3V1H1 664 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Sept9Q80UG5 583 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Llgl1Q80Y17 1036 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 ClasrpQ8CFC7 668 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms