RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Sept1P42209 366 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 TxkP42682 527 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ccdc110Q3V125 848 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Sval3Q76I99 144 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Epn1Q80VP1 575 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 AsphQ8BSY0 741 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Unc13aQ4KUS2 1712 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm5580A0A0N4SVP8 411 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm6583E9Q8Z1 469 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm10488Q4KL05 212 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tmem179Q8BHH9 233 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rasgrp4Q8BTM9 673 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Mettl24Q8CCB5 363 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 TbcbQ9D1E6 244 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gipc1Q9Z0G0 333 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Mtmr2Q9Z2D1 643 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Card6E9PWH2 1175 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Heatr4E9Q357 955 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Islr2Q5RKR3 745 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Atp2a3Q64518 1038 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 HgsQ99LI8 775 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tex13cD3YU32 604 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tnnc2P20801 160 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Anks1bQ8BIZ1 1259 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Kat14Q8CID0 779 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Spata4Q8K3V1 295 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cep83Q9D5R3 692 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 NeblQ0II04 452 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Esyt2Q3TZZ7 845 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Trim37Q6PCX9 961 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Igsf3Q6ZQA6 1194 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Antxr1Q9CZ52 562 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 4931423N10RikQ9D4J9 382 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm9992B2RWK3 458 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Unc93aQ710D3 458 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Nfe2l3Q9WTM4 660 aa18.15■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Nedd9O35177 833 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 NsfP46460 744 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Nxf2Q4ZGD8 691 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Lrrc41Q8K1C9 807 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Add3Q9QYB5 706 aaKnown RBP18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Usp53P15975 1069 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Kctd1Q5M956 257 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Actr5Q80US4 605 aaKnown RBP18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Polr2bQ8CFI7 1174 aaKnown RBP18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Krt34Q9D646 392 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Cacna2d3Q9Z1L5 1091 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Pgrmc1O55022 195 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Fam228bQ497Q6 232 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Znf652Q5DU09 608 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ddx39aQ8VDW0 427 aaKnown RBP18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Hps3Q91VB4 1002 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Dnajc17Q91WT4 303 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Spc24Q9D083 201 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Rps6ka2Q9WUT3 733 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Gm45194A0A140LJG2 572 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 AbraQ8BUZ1 375 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Rps6ka5Q8C050 863 aa18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Kif14L0N7N1 1674 aaKnown RBP18.14■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Tsr1Q5SWD9 803 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Naa35Q6PHQ8 725 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Atp6v1e2Q9D593 226 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Rfc1P35601 1131 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 PhbP67778 272 aaKnown RBP18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Lrriq3Q14DL3 633 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Glra4Q61603 456 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Swap70Q6A028 585 aaKnown RBP18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Znf219Q6IQX8 726 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 KhnynQ80U38 671 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ankrd49Q8VE42 238 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Erp44Q9D1Q6 406 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Snrnp35Q9D384 244 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Nup62clA2AG10 272 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Taf4bG5E8Z2 855 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Krt12Q64291 487 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ppp2r5dQ91V89 594 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Dnajb7Q9QYI8 312 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Kdm6bQ5NCY0 1641 aa18.13■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 MybP06876 636 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Rimbp2Q80U40 1072 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Psmd6Q99JI4 389 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Mei1Q9D4I2 1268 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Proca1B0QZF7 307 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Pald1P70261 859 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ppp1r12cQ3UMT1 782 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Krt24A1L317 512 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Brpf3B2KF05 1204 aaKnown RBP18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Surf6P70279 355 aaKnown RBP18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Q3TYL0 343 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Hace1Q3U0D9 909 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Cdc37Q61081 379 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Oxsr1Q6P9R2 527 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ccdc87Q8CDL9 855 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Drc3Q9D5E4 523 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 IdeQ9JHR7 1019 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Cyp3a25O09158 503 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Rnf207Q3V3A7 635 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ankrd45Q810N6 248 aa18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Ddx24Q9ESV0 857 aaKnown RBP18.12■□□□□ 0.49
Ubfd1-201ENSMUST00000033158 Hdac4Q6NZM9 1076 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms