RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Prl2c5Q9JLV9 222 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 GpiP06745 558 aaKnown RBP11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Capza3P70190 299 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Dok7Q18PE0 504 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Prpf38aQ4FK66 312 aaKnown RBP11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tmtc2Q56A06 836 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ildr1Q8CBR1 537 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Exoc1Q8R3S6 894 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Gdap1l1Q8VE33 370 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Q91WD4 421 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Trub2Q91WG3 331 aaKnown RBP11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 RtcbQ99LF4 505 aaKnown RBP11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Git2Q9JLQ2 708 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Jag1Q9QXX0 1218 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 SrcapA0A087WQ44 3271 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Scn11aQ9R053 1765 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Copb2O55029 905 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Pbx1P41778 430 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Evi5P97366 809 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Fam196bQ6GQV1 535 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Adck2Q6NSR3 617 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Cypt2Q6P924 180 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Epn1Q80VP1 575 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Prpf40bQ80W14 870 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ccdc122Q8BVN0 290 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Cep95Q8BVV7 827 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Hgh1Q8C3I8 393 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ppfibp1Q8C8U0 969 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Atp1a1Q8VDN2 1023 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 HibadhQ99L13 335 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Rmi1Q9D4G9 616 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Zranb2Q9R020 330 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ulk4Q3V129 1303 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Parp1P11103 1013 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Spout1Q3UHX9 385 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 KhnynQ80U38 671 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Gpt2Q8BGT5 522 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Q8C5C9 218 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 AdpgkQ8VDL4 496 aa11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Smc1aQ9CU62 1233 aaKnown RBP11.9□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Impdh2P24547 514 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Pola2P33611 600 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Eya3P97480 510 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Foxn3Q499D0 457 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cep131Q62036 1060 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gja3Q64448 417 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Iqcb1Q8BP00 598 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tmem63cQ8CBX0 802 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mettl5Q8K1A0 209 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lrrc41Q8K1C9 807 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Matr3Q8K310 846 aaKnown RBP11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Eps8l1Q8R5F8 716 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Smc1bQ920F6 1248 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Coro7Q9D2V7 922 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc97Q9DBT3 340 aa11.9□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Calcoco2A2A6M5 331 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 MybP06876 636 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tbc1d2bQ3U0J8 965 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mcm7Q61881 719 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cabp7Q91ZM8 215 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mmtag2Q99LX5 260 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Akt1s1Q9D1F4 257 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Uso1Q9Z1Z0 959 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Pabpc1lA2A5N3 607 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rsrc2A2RTL5 376 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gm5934D3Z4U6 212 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Terf1P70371 421 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Scg2Q03517 617 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ssrp1Q08943 708 aaKnown RBP11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Brsk2Q69Z98 735 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc57Q6PHN1 1016 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Fermt2Q8CIB5 680 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc83Q9D4V3 305 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Trp53inp1Q9QXE4 239 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Myh8P13542 1937 aa11.89□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Serpina16D3Z660 418 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gm6588E9Q3K0 461 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Zmym1Q3TJB1 983 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Spg7Q3ULF4 781 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ankrd13cQ3UX43 541 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Fhod1Q6P9Q4 1197 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 TxlnaQ6PAM1 554 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Aggf1Q7TN31 711 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dlg1Q811D0 905 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Hpcal4Q8BGZ1 191 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cdc23Q8BGZ4 597 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tmem179Q8BHH9 233 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Fam193aQ8CGI1 1231 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cdk8Q8R3L8 464 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ankrd49Q8VE42 238 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Snrnp35Q9D384 244 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mss51Q9D5Z5 446 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Kif23E9Q5G3 953 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mdh1P14152 334 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 GalcP54818 684 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Jakmip3Q5DTN8 844 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cep112Q5PR68 954 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Atxn2lQ7TQH0 1049 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ttc26Q8BS45 554 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gpcpd1Q8C0L9 675 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms