RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Acsbg2Q2XU92 667 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Q3TYL0 343 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 C87499Q3UX49 493 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Dnph1Q80VJ3 173 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gga3Q8BMI3 718 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rbm43Q99J64 343 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tbc1d7Q9D0K0 293 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tfcp2Q9ERA0 502 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ugt1a8D3Z748 530 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ugt1a10E9PXN7 530 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 CltaO08585 235 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Api5O35841 504 aaKnown RBP13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 MycnP03966 462 aaKnown RBP13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Epb41l4aP52963 686 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rnf180Q3U827 592 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Skap1Q3UUV5 355 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rc3h1Q4VGL6 1130 aaKnown RBP13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Naa35Q6PHQ8 725 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ttc19Q8CC21 365 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tmem134Q8R0J4 195 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Trim29Q8R2Q0 587 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Sgip1Q8VD37 806 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 LrmdaQ9D9B4 229 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Trp53inp1Q9QXE4 239 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Pcdh11xF6ZNL5 1338 aa13.4□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm21969J3QJZ1 289 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Meis3P97368 378 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klra9Q2TJJ8 266 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Trim43aQ3TL54 445 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Tmprss11aQ3UQ41 389 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cnnm4Q69ZF7 771 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Mettl25Q6NXH8 597 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Sptlc3Q8BG54 563 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 TxlnbQ8VBT1 685 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Smc6Q924W5 1097 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 LpxnQ99N69 386 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klra17Q9JMA4 273 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klra10Q9R1G6 266 aa13.4□□□□□ -0.27
Ufd1-201ENSMUST00000005394 A0A0U1RNP2 1173 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Wnt7aP24383 349 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Plbd2Q3TCN2 594 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Spout1Q3UHX9 385 aaKnown RBP13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Nr1d1Q3UV55 615 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ift20Q61025 132 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klra3Q64329 266 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Krit1Q6S5J6 736 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 GypcQ78HU7 95 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Zic5Q7TQ40 622 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ccdc181Q80ZU5 509 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ildr1Q8CBR1 537 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Chchd3Q9CRB9 227 aaKnown RBP13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Mis18aQ9CZJ6 204 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klhl10Q9D5V2 608 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cmtr1Q9DBC3 837 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Fmnl1Q9JL26 1094 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 SufuQ9Z0P7 484 aa13.39□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Map7d1A2AJI0 846 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pde8bE9Q4S1 865 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 MthfslL7N466 203 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cyp2c67Q569X9 491 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Agtpbp1Q641K1 1218 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Git1Q68FF6 770 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Antxr2Q6DFX2 487 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 H6pdQ8CFX1 789 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Q91WD4 421 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Plagl2Q925T4 496 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gigyf1Q99MR1 1044 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Sept12Q9D451 317 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Myo1hQ9D6A1 958 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rapgef4Q9EQZ6 1011 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Kiaa1522A2A7S8 1013 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ces1hD3Z298 562 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Akr1b10G5E895 316 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ppef1O35655 650 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Calm1P0DP26 149 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Calm2P0DP27 149 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Calm3P0DP28 149 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slurp2P0DP59 97 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Zfy1P10925 782 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Tgfb2P27090 414 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rnpc3Q3UZ01 514 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Krt42Q6IFX2 452 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ddx42Q810A7 929 aaKnown RBP13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rnf187Q8BFX1 236 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ttc7aQ8BGB2 858 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pak2Q8CIN4 524 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rnaseh2aQ9CWY8 301 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Alpk1Q9CXB8 1231 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 PigoQ9JJI6 1093 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Mroh6V9GX81 722 aa13.38□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Myh15E9Q264 1925 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Togaram1Q6A070 1776 aaKnown RBP13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ttc13A0A1L1SSC7 844 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Prr5lA2AVJ5 370 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Palm3A2TJV2 734 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gm4307E9PZY4 289 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gm4312K9J7E2 289 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 MarcksP26645 309 aaKnown RBP13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cyp19a1P28649 503 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Wdhd1P59328 1117 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms