RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	FAR10	Q06001	478 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	SEC10	Q06245	871 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	CRN1	Q06440	651 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	HDA3	Q06623	655 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	SNX3	Q08826	162 aa	Known RBP	4.81	□□□□□ -1.64
NHP6A	YPR052C	TFB4	Q12004	338 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	SKM1	Q12469	655 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	YPL247C	Q12523	523 aa		4.81	□□□□□ -1.64
NHP6A	YPR052C	CAR1	P00812	333 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	RPL24A	P04449	155 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	YKR104W	P0CE69	306 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	AMD1	P15274	810 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	VPS34	P22543	875 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	PHO3	P24031	467 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	YSP3	P25036	478 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	YCR090C	P25654	182 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	YCR099C	P25657	155 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	PMT1	P33775	817 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	SWH1	P35845	1188 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	TFA2	P36145	328 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	TAE1	P38340	232 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	MUP3	P38734	546 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	HAT2	P39984	401 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	RGI2	P40188	164 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	RLP7	P40693	322 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	AMA1	P50082	593 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	SAP4	P53036	818 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	BOL2	P53082	120 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	COG2	P53271	262 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	CUS2	P53830	285 aa	Predicted RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	SLM2	P53955	656 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	EFM6	P53970	246 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	TGL2	P54857	326 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	REX2	P54964	269 aa	Known RBP	4.8	□□□□□ -1.64
NHP6A	YPR052C	YDR476C	Q03362	224 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	VID22	Q05934	901 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	TRE2	Q08693	809 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	NUS1	Q12063	375 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	UBX3	Q12229	455 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	MDY2	Q12285	212 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	GPR1	Q12361	961 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	TY4A-H	Q6Q5P6	413 aa		4.8	□□□□□ -1.64
NHP6A	YPR052C	SEC53	P07283	254 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	NMT1	P14743	455 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	PDC5	P16467	563 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	ART10	P18634	518 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	MRPL8	P22353	238 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	SAN1	P22470	610 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	MNE1	P24720	663 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	RBK1	P25332	333 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	DCC1	P25559	380 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	BUD14	P27637	709 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	GUT2	P32191	649 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	AEP1	P32493	518 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	PTM1	P32857	523 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	IMP3	P32899	183 aa	Predicted RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	PTC1	P35182	281 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	HES1	P35843	434 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	ALY1	P36117	915 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	RIM11	P38615	370 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	SRP72	P38688	640 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	GND1	P38720	489 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	CHS7	P38843	316 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	CCT6	P39079	546 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	ACO2	P39533	789 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	COA1	P40452	197 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	MAM33	P40513	266 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YIL001W	P40560	513 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	VMA13	P41807	478 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	TES1	P41903	349 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	YFR018C	P43599	363 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	NUP85	P46673	744 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	SET2	P46995	733 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	YJR124C	P47159	448 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	ARH1	P48360	493 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	MNT2	P53059	558 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	COS6	P53344	381 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YNL010W	P53981	241 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	PRO2	P54885	456 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	LSM3	P57743	89 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	SPP2	Q02521	185 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	RMI1	Q02685	241 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	PIR1	Q03178	341 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YDR132C	Q03900	495 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	HFD1	Q04458	532 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	BLS1	Q06071	122 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YPR114W	Q06107	315 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	BCP1	Q06338	283 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YEH2	Q07950	538 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	YIG1	Q08956	461 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	MRH1	Q12117	320 aa	Predicted RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	PEX11	Q12462	236 aa		4.79	□□□□□ -1.64
NHP6A	YPR052C	PRP8	P33334	2413 aa	Known RBP	4.79	□□□□□ -1.64
NHP6A	YPR052C	SCH9	P11792	824 aa	Known RBP	4.78	□□□□□ -1.64
NHP6A	YPR052C	GCD2	P12754	651 aa	Predicted RBP	4.78	□□□□□ -1.64
NHP6A	YPR052C	PTH2	P34222	208 aa		4.78	□□□□□ -1.64
NHP6A	YPR052C	CTF13	P35203	478 aa		4.78	□□□□□ -1.64
NHP6A	YPR052C	MAK5	P38112	773 aa	Predicted RBP	4.78	□□□□□ -1.64
NHP6A	YPR052C	ARN1	P38731	627 aa		4.78	□□□□□ -1.64
NHP6A	YPR052C	ALG8	P40351	577 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms