RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W NUP120P35729 1037 aa8.12□□□□□ -1.11
YPT11YNL304W CTP1P38152 299 aa8.12□□□□□ -1.11
YPT11YNL304W FZO1P38297 855 aa8.12□□□□□ -1.11
YPT11YNL304W YHR045WP38775 560 aa8.12□□□□□ -1.11
YPT11YNL304W CCT6P39079 546 aa8.12□□□□□ -1.11
YPT11YNL304W UTP18P40362 594 aaPredicted RBP8.12□□□□□ -1.11
YPT11YNL304W COQ5P49017 307 aa8.12□□□□□ -1.11
YPT11YNL304W ART5P53244 586 aaKnown RBP8.12□□□□□ -1.11
YPT11YNL304W ZRG17P53735 605 aa8.12□□□□□ -1.11
YPT11YNL304W YNL010WP53981 241 aaKnown RBP8.12□□□□□ -1.11
YPT11YNL304W YML131WQ03102 365 aa8.12□□□□□ -1.11
YPT11YNL304W FMN1Q03778 218 aa8.12□□□□□ -1.11
YPT11YNL304W HPF1Q05164 967 aa8.12□□□□□ -1.11
YPT11YNL304W YPL225WQ08971 146 aaKnown RBP8.12□□□□□ -1.11
YPT11YNL304W CAR1P00812 333 aaKnown RBP8.11□□□□□ -1.11
YPT11YNL304W RSC6P25632 483 aa8.11□□□□□ -1.11
YPT11YNL304W RFA2P26754 273 aaKnown RBP8.11□□□□□ -1.11
YPT11YNL304W CCR4P31384 837 aaKnown RBP8.11□□□□□ -1.11
YPT11YNL304W SPR1P32603 445 aa8.11□□□□□ -1.11
YPT11YNL304W RIM11P38615 370 aa8.11□□□□□ -1.11
YPT11YNL304W YHR020WP38708 688 aaKnown RBP8.11□□□□□ -1.11
YPT11YNL304W TIM17P39515 158 aa8.11□□□□□ -1.11
YPT11YNL304W TMA22P47089 198 aaPredicted RBP8.11□□□□□ -1.11
YPT11YNL304W BIR1P47134 954 aa8.11□□□□□ -1.11
YPT11YNL304W NNF2P53253 936 aa8.11□□□□□ -1.11
YPT11YNL304W YNL260CP53846 198 aa8.11□□□□□ -1.11
YPT11YNL304W YDR056CQ12025 205 aa8.11□□□□□ -1.11
YPT11YNL304W BRR1Q99177 341 aaPredicted RBP8.11□□□□□ -1.11
YPT11YNL304W Q0182Q9ZZW1 134 aa8.11□□□□□ -1.11
YPT11YNL304W TRP3P00937 484 aa8.1□□□□□ -1.11
YPT11YNL304W COS2P0CX12 379 aa8.1□□□□□ -1.11
YPT11YNL304W COS3P0CX13 379 aa8.1□□□□□ -1.11
YPT11YNL304W YAR066WP0CX18 203 aa8.1□□□□□ -1.11
YPT11YNL304W YHR214WP0CX19 203 aa8.1□□□□□ -1.11
YPT11YNL304W PRP6P19735 899 aaPredicted RBP8.1□□□□□ -1.11
YPT11YNL304W PWP1P21304 576 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W CRM1P30822 1084 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W ATP11P32453 318 aa8.1□□□□□ -1.11
YPT11YNL304W GIP1P38229 639 aa8.1□□□□□ -1.11
YPT11YNL304W HXT5P38695 592 aa8.1□□□□□ -1.11
YPT11YNL304W RRP3P38712 501 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W HSE1P38753 452 aa8.1□□□□□ -1.11
YPT11YNL304W ARB1P40024 610 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W YJL070CP40361 888 aa8.1□□□□□ -1.11
YPT11YNL304W COS4P43542 379 aa8.1□□□□□ -1.11
YPT11YNL304W NBP35P52920 328 aa8.1□□□□□ -1.11
YPT11YNL304W REX2P54964 269 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W RIF2Q06208 395 aa8.1□□□□□ -1.11
YPT11YNL304W TRM8Q12009 286 aa8.1□□□□□ -1.11
YPT11YNL304W UPC2Q12151 913 aa8.1□□□□□ -1.11
YPT11YNL304W RIB2Q12362 591 aaKnown RBP8.1□□□□□ -1.11
YPT11YNL304W SRN2Q99176 213 aa8.1□□□□□ -1.11
YPT11YNL304W FAB1P34756 2278 aa8.1□□□□□ -1.11
YPT11YNL304W CDC21P06785 304 aa8.09□□□□□ -1.11
YPT11YNL304W PMR1P13586 950 aa8.09□□□□□ -1.11
YPT11YNL304W CUE2P36075 443 aaKnown RBP8.09□□□□□ -1.11
YPT11YNL304W YHL008CP38750 627 aa8.09□□□□□ -1.11
YPT11YNL304W NPT1P39683 429 aaKnown RBP8.09□□□□□ -1.11
YPT11YNL304W GIM4P40005 111 aaKnown RBP8.09□□□□□ -1.11
YPT11YNL304W EMP65P40085 556 aa8.09□□□□□ -1.11
YPT11YNL304W NIS1P53939 407 aa8.09□□□□□ -1.11
YPT11YNL304W YNL035CP53962 389 aaKnown RBP8.09□□□□□ -1.11
YPT11YNL304W TRM12Q04235 462 aa8.09□□□□□ -1.11
YPT11YNL304W YDR338CQ05497 695 aa8.09□□□□□ -1.11
YPT11YNL304W HEL2Q05580 639 aaKnown RBP8.09□□□□□ -1.11
YPT11YNL304W VPS68Q12016 184 aa8.09□□□□□ -1.11
YPT11YNL304W YLR049CQ12110 428 aa8.09□□□□□ -1.11
YPT11YNL304W SWI5P08153 709 aa8.08□□□□□ -1.12
YPT11YNL304W MET8P15807 274 aa8.08□□□□□ -1.12
YPT11YNL304W HCM1P25364 564 aa8.08□□□□□ -1.12
YPT11YNL304W BUB2P26448 306 aaPredicted RBP8.08□□□□□ -1.12
YPT11YNL304W OXP1P28273 1286 aa8.08□□□□□ -1.12
YPT11YNL304W RAD14P28519 371 aa8.08□□□□□ -1.12
YPT11YNL304W RPS1AP33442 255 aaKnown RBP8.08□□□□□ -1.12
YPT11YNL304W VRP1P37370 817 aa8.08□□□□□ -1.12
YPT11YNL304W ARN1P38731 627 aa8.08□□□□□ -1.12
YPT11YNL304W UBA4P38820 440 aa8.08□□□□□ -1.12
YPT11YNL304W YEN1P40028 759 aa8.08□□□□□ -1.12
YPT11YNL304W FKH2P41813 862 aa8.08□□□□□ -1.12
YPT11YNL304W HST3P53687 447 aa8.08□□□□□ -1.12
YPT11YNL304W YPL113CQ02961 396 aa8.08□□□□□ -1.12
YPT11YNL304W YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
YPT11YNL304W ESA1Q08649 445 aa8.08□□□□□ -1.12
YPT11YNL304W RPN8Q08723 338 aaKnown RBP8.08□□□□□ -1.12
YPT11YNL304W SAM4Q08985 325 aaKnown RBP8.08□□□□□ -1.12
YPT11YNL304W TFB4Q12004 338 aa8.08□□□□□ -1.12
YPT11YNL304W RRP42Q12277 265 aaPredicted RBP8.08□□□□□ -1.12
YPT11YNL304W HSH49Q99181 213 aaPredicted RBP8.08□□□□□ -1.12
YPT11YNL304W NHA1Q99271 985 aa8.08□□□□□ -1.12
YPT11YNL304W SAS5Q99314 248 aa8.08□□□□□ -1.12
YPT11YNL304W INH1P01097 85 aa8.07□□□□□ -1.12
YPT11YNL304W GUK1P15454 187 aaKnown RBP8.07□□□□□ -1.12
YPT11YNL304W VPS34P22543 875 aa8.07□□□□□ -1.12
YPT11YNL304W PHO87P25360 923 aa8.07□□□□□ -1.12
YPT11YNL304W PDB1P32473 366 aaKnown RBP8.07□□□□□ -1.12
YPT11YNL304W CBF5P33322 483 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
YPT11YNL304W LRG1P35688 1017 aa8.07□□□□□ -1.12
YPT11YNL304W TCD2P36101 447 aaKnown RBP8.07□□□□□ -1.12
YPT11YNL304W MUM2P38236 366 aa8.07□□□□□ -1.12
YPT11YNL304W BAT1P38891 393 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms