RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YMR160W	Q03823	816 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	HSP42	Q12329	375 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	NPC2	Q12408	173 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	OCA6	Q12454	224 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	RPP2A	P05319	106 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	CLC1	P17891	233 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	PRI2	P20457	528 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	UBA1	P22515	1024 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	RBK1	P25332	333 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	RFA2	P26754	273 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	SIN4	P32259	974 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	CDC13	P32797	924 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	MOH1	P38191	138 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	IML3	P38265	245 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	TDA3	P38758	523 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	YER130C	P39959	443 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	MKT1	P40850	830 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	SSU1	P41930	458 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	HLJ1	P48353	224 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	SXM1	Q04175	944 aa	Known RBP	5.77	□□□□□ -1.49
CSL4	YNL232W	EMI1	Q04406	187 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	ESC2	Q06340	456 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	GPM3	Q12326	303 aa		5.77	□□□□□ -1.49
CSL4	YNL232W	CDC37	P06101	506 aa	Known RBP	5.76	□□□□□ -1.49
CSL4	YNL232W	NTH1	P32356	751 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	SPC110	P32380	944 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	OAR1	P35731	278 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	CTP1	P38152	299 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	SWC5	P38326	303 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	YHL041W	P38730	149 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	RRT5	P43607	289 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	TCB2	P48231	1178 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	YGL108C	P53139	140 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	PEX25	Q02969	394 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	YDR222W	Q04925	415 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	FMP45	Q07651	309 aa		5.76	□□□□□ -1.49
CSL4	YNL232W	HBT1	Q07653	1046 aa	Known RBP	5.76	□□□□□ -1.49
CSL4	YNL232W	NEW1	Q08972	1196 aa	Known RBP	5.76	□□□□□ -1.49
CSL4	YNL232W	DDP1	Q99321	188 aa	Known RBP	5.76	□□□□□ -1.49
CSL4	YNL232W	FAS1	P07149	2051 aa	Known RBP	5.76	□□□□□ -1.49
CSL4	YNL232W	CDC9	P04819	755 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	GPA1	P08539	472 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	FUN30	P31380	1131 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	NIP100	P33420	868 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	CAB3	P36076	571 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	DED81	P38707	554 aa	Known RBP	5.75	□□□□□ -1.49
CSL4	YNL232W	RPH1	P39956	796 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	YJL132W	P47014	750 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	PGC1	Q08959	321 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	PFA4	Q12006	378 aa		5.75	□□□□□ -1.49
CSL4	YNL232W	COX5A	P00424	153 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	HOP1	P20050	605 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	EPT1	P22140	391 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	YCL042W	P25572	119 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	PLC1	P32383	869 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	HOG1	P32485	435 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	PET309	P32522	965 aa	Predicted RBP	5.74	□□□□□ -1.49
CSL4	YNL232W	PHO11	P35842	467 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	EMC3	P36039	253 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	MRPL37	P36532	105 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	BIT2	P38346	545 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	PHO12	P38693	467 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	MTG2	P38860	518 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	CYC2	P38909	366 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	LYS1	P38998	373 aa	RIP-Chip data	5.74	□□□□□ -1.49	not detected
CSL4	YNL232W	ERP2	P39704	215 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	TMN3	P40071	706 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	ATM1	P40416	690 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	URM1	P40554	99 aa	Predicted RBP	5.74	□□□□□ -1.49
CSL4	YNL232W	YFR018C	P43599	363 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	TIM13	P53299	105 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	ARP4	P80428	489 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	YML122C	Q03207	126 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	SPO20	Q04359	397 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	YLR030W	Q07967	263 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	ENB1	Q08299	606 aa		5.74	□□□□□ -1.49
CSL4	YNL232W	CWC2	Q12046	339 aa	Predicted RBP	5.74	□□□□□ -1.49
CSL4	YNL232W	RRP12	Q12754	1228 aa	Known RBP	5.74	□□□□□ -1.49
CSL4	YNL232W	ILS1	P09436	1072 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	SEC62	P21825	274 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	TRX1	P22217	103 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	KAR4	P25583	335 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	HXT3	P32466	567 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	SPS19	P32573	292 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	PET127	P32606	800 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	MRS6	P32864	603 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	SKN1	P33336	771 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	YET1	P35723	206 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	MIA40	P36046	403 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	RRP14	P36080	434 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	YBR259W	P38338	688 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	STN1	P38960	494 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	LRO1	P40345	661 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	IST3	P40565	148 aa	Predicted RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	BUD13	P46947	266 aa	Predicted RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	MNN11	P46985	422 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	YJR030C	P47101	745 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	ASK10	P48361	1146 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	BUL1	P48524	976 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	STR3	P53101	465 aa	Known RBP	5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms