RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C MGT1P26188 188 aa4.65□□□□□ -1.66
EAR1YMR171C ICL1P28240 557 aaPredicted RBP4.65□□□□□ -1.66
EAR1YMR171C COY1P34237 679 aa4.65□□□□□ -1.66
EAR1YMR171C MRX3P38172 270 aa4.65□□□□□ -1.66
EAR1YMR171C YBR032WP38223 100 aa4.65□□□□□ -1.66
EAR1YMR171C PHO88P38264 188 aaPredicted RBP4.65□□□□□ -1.66
EAR1YMR171C RFC3P38629 340 aa4.65□□□□□ -1.66
EAR1YMR171C YHR097CP38809 366 aaKnown RBP4.65□□□□□ -1.66
EAR1YMR171C SWD1P39706 426 aa4.65□□□□□ -1.66
EAR1YMR171C ALG5P40350 334 aa4.65□□□□□ -1.66
EAR1YMR171C LIA1P47120 325 aaKnown RBP4.65□□□□□ -1.66
EAR1YMR171C TEP1P53916 434 aa4.65□□□□□ -1.66
EAR1YMR171C MOT3P54785 490 aaKnown RBP4.65□□□□□ -1.66
EAR1YMR171C BET4Q00618 327 aa4.65□□□□□ -1.66
EAR1YMR171C RPA49Q01080 415 aaPredicted RBP4.65□□□□□ -1.66
EAR1YMR171C CEF1Q03654 590 aaPredicted RBP4.65□□□□□ -1.66
EAR1YMR171C PRM6Q04705 352 aa4.65□□□□□ -1.66
EAR1YMR171C YDR278CQ05612 105 aa4.65□□□□□ -1.66
EAR1YMR171C CRD1Q07560 283 aa4.65□□□□□ -1.66
EAR1YMR171C HOS1Q12214 470 aa4.65□□□□□ -1.66
EAR1YMR171C OCA6Q12454 224 aa4.65□□□□□ -1.66
EAR1YMR171C RRD2Q12461 358 aa4.65□□□□□ -1.66
EAR1YMR171C TY1B-AO13527 1196 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C ADE3P07245 946 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C TPS2P31688 896 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C FUI1P38196 639 aa4.64□□□□□ -1.67
EAR1YMR171C CBR1P38626 284 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C ASG1P40467 964 aa4.64□□□□□ -1.67
EAR1YMR171C TAM41P53230 385 aa4.64□□□□□ -1.67
EAR1YMR171C YGR054WP53235 642 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C YGR151CP53287 111 aa4.64□□□□□ -1.67
EAR1YMR171C ATG4P53867 494 aa4.64□□□□□ -1.67
EAR1YMR171C SMX3P54999 86 aaPredicted RBP4.64□□□□□ -1.67
EAR1YMR171C YDL086WQ07505 273 aa4.64□□□□□ -1.67
EAR1YMR171C IWR1Q07532 353 aaPredicted RBP4.64□□□□□ -1.67
EAR1YMR171C SMC5Q08204 1093 aa4.64□□□□□ -1.67
EAR1YMR171C MCH5Q08777 521 aa4.64□□□□□ -1.67
EAR1YMR171C ACF2Q12168 779 aa4.64□□□□□ -1.67
EAR1YMR171C RUP1Q12242 671 aa4.64□□□□□ -1.67
EAR1YMR171C NKP1Q12493 238 aa4.64□□□□□ -1.67
EAR1YMR171C ABF1P14164 731 aa4.64□□□□□ -1.67
EAR1YMR171C TAL1P15019 335 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C APA1P16550 321 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C AAD3P25612 363 aa4.64□□□□□ -1.67
EAR1YMR171C COT1P32798 439 aa4.64□□□□□ -1.67
EAR1YMR171C CSG2P35206 410 aa4.64□□□□□ -1.67
EAR1YMR171C UBP11P36026 717 aa4.64□□□□□ -1.67
EAR1YMR171C ELF1P36053 145 aa4.64□□□□□ -1.67
EAR1YMR171C DUG2P38149 878 aa4.64□□□□□ -1.67
EAR1YMR171C UBS1P38290 277 aa4.64□□□□□ -1.67
EAR1YMR171C JEM1P40358 645 aa4.64□□□□□ -1.67
EAR1YMR171C MAD3P47074 515 aa4.64□□□□□ -1.67
EAR1YMR171C CPR7P47103 393 aa4.64□□□□□ -1.67
EAR1YMR171C HSH155P49955 971 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C DRN1P53255 507 aaKnown RBP4.64□□□□□ -1.67
EAR1YMR171C SLI1P53304 468 aa4.64□□□□□ -1.67
EAR1YMR171C COS6P53344 381 aa4.64□□□□□ -1.67
EAR1YMR171C YSH1Q06224 779 aaPredicted RBP4.64□□□□□ -1.67
EAR1YMR171C YLR053CQ12026 108 aa4.64□□□□□ -1.67
EAR1YMR171C RTP1Q12751 981 aa4.64□□□□□ -1.67
EAR1YMR171C MOT1P32333 1867 aa4.63□□□□□ -1.67
EAR1YMR171C ILS1P09436 1072 aaKnown RBP4.63□□□□□ -1.67
EAR1YMR171C SSC1P0CS90 654 aaKnown RBP4.63□□□□□ -1.67
EAR1YMR171C MSM1P22438 575 aa4.63□□□□□ -1.67
EAR1YMR171C SPS22P25380 463 aa4.63□□□□□ -1.67
EAR1YMR171C DPH5P32469 300 aaPredicted RBP4.63□□□□□ -1.67
EAR1YMR171C SMF2P38778 549 aa4.63□□□□□ -1.67
EAR1YMR171C YEL025CP39991 1188 aa4.63□□□□□ -1.67
EAR1YMR171C IES5P40060 125 aa4.63□□□□□ -1.67
EAR1YMR171C LRO1P40345 661 aa4.63□□□□□ -1.67
EAR1YMR171C PHO86P46956 311 aa4.63□□□□□ -1.67
EAR1YMR171C STB4P50104 949 aa4.63□□□□□ -1.67
EAR1YMR171C SHE10P53075 577 aa4.63□□□□□ -1.67
EAR1YMR171C LSC1P53598 329 aaKnown RBP4.63□□□□□ -1.67
EAR1YMR171C DAK1P54838 584 aaKnown RBP4.63□□□□□ -1.67
EAR1YMR171C YKU80Q04437 629 aa4.63□□□□□ -1.67
EAR1YMR171C GSF2Q04697 403 aaKnown RBP4.63□□□□□ -1.67
EAR1YMR171C TRI1Q05024 226 aa4.63□□□□□ -1.67
EAR1YMR171C ARR3Q06598 404 aa4.63□□□□□ -1.67
EAR1YMR171C YDR018CQ12185 396 aa4.63□□□□□ -1.67
EAR1YMR171C AI5_BETAQ9ZZX0 354 aa4.63□□□□□ -1.67
EAR1YMR171C LAA1P39526 2014 aa4.62□□□□□ -1.67
EAR1YMR171C RPL24AP04449 155 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C NAT1P12945 854 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C GYP6P32806 458 aa4.62□□□□□ -1.67
EAR1YMR171C YBP1P38315 674 aa4.62□□□□□ -1.67
EAR1YMR171C KSP1P38691 1029 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C MSR1P38714 643 aa4.62□□□□□ -1.67
EAR1YMR171C ERC1P38767 581 aa4.62□□□□□ -1.67
EAR1YMR171C PPE1P38796 400 aa4.62□□□□□ -1.67
EAR1YMR171C KEL1P38853 1164 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C TDA11P38854 504 aa4.62□□□□□ -1.67
EAR1YMR171C ACA1P39970 489 aa4.62□□□□□ -1.67
EAR1YMR171C ARG2P40360 574 aa4.62□□□□□ -1.67
EAR1YMR171C SAE2P46946 345 aa4.62□□□□□ -1.67
EAR1YMR171C YNL247WP53852 767 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C YML037CQ03703 340 aa4.62□□□□□ -1.67
EAR1YMR171C PPM1Q04081 328 aa4.62□□□□□ -1.67
EAR1YMR171C SXM1Q04175 944 aaKnown RBP4.62□□□□□ -1.67
EAR1YMR171C SPE4Q12455 300 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 113.3 ms