RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	MCD1	Q12158	566 aa		4.19	□□□□□ -1.74
FOX2	YKR009C	YBR056W-A	I2HB52	66 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	TEF1	P02994	458 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	RED1	P14291	827 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	RSC6	P25632	483 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	DPB3	P27344	201 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	HOG1	P32485	435 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	GCD14	P46959	383 aa	Predicted RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	RIM21	P48565	533 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	LSC1	P53598	329 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	LEU9	Q12166	604 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	ICT1	Q12385	394 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	STE2	D6VTK4	431 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	SPS1	P08458	490 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	GPA2	P10823	449 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	PDC5	P16467	563 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	CLN2	P20438	545 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	SQT1	P35184	431 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	RRP14	P36080	434 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	LYS1	P38998	373 aa	RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
FOX2	YKR009C	CCT4	P39078	528 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	PFA3	P42836	336 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	YGR250C	P53316	781 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	BUD32	P53323	261 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	HOS3	Q02959	697 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	RPN9	Q04062	393 aa	Known RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	YDL121C	Q07541	149 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	YOL024W	Q08172	172 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	IRC13	Q08630	104 aa		4.18	□□□□□ -1.74
FOX2	YKR009C	MRH1	Q12117	320 aa	Predicted RBP	4.18	□□□□□ -1.74
FOX2	YKR009C	PRP16	P15938	1071 aa	Predicted RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	PET123	P17558	318 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	SEC15	P22224	910 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	LDB16	P25587	256 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	HRR25	P29295	494 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	PEP12	P32854	288 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	UBC6	P33296	250 aa	Predicted RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	DOM34	P33309	386 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	EMC3	P36039	253 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	RIM11	P38615	370 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	MTG2	P38860	518 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	YHR182W	P38870	785 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	LSM5	P40089	93 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	NDC80	P40460	691 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	TFG1	P41895	735 aa	Predicted RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	YJL049W	P47048	450 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	YGR266W	P53326	701 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	HST3	P53687	447 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	TRS23	Q03784	219 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	VHS1	Q03785	461 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	HTA1	P04911	132 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	HTA2	P04912	132 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	ERG20	P08524	352 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	ILS1	P09436	1072 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	AMD2	P22580	549 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	ARG1	P22768	420 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	PTP1	P25044	335 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	BUB3	P26449	341 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	TOA1	P32773	286 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	MGM101	P32787	269 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	BYE1	P36106	594 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	MUP3	P38734	546 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	GGC1	P38988	300 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	YNL320W	P42840	284 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	SVL3	Q03088	825 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	MTQ2	Q03920	221 aa	Predicted RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	YMR027W	Q04371	470 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	ADE13	Q05911	482 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	UTP13	Q05946	817 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	ACM1	Q08981	209 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	AIR2	Q12476	344 aa	Known RBP	4.17	□□□□□ -1.74
FOX2	YKR009C	LAG2	Q92325	660 aa		4.17	□□□□□ -1.74
FOX2	YKR009C	AI3	P03877	415 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	MSB1	P21339	1137 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	KAR4	P25583	335 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	IMG1	P25626	169 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	PET309	P32522	965 aa	Predicted RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	SKT5	P34226	696 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	SET3	P36124	751 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	MRPL15	P36523	253 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	YHR127W	P38833	243 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	SPF1	P39986	1215 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	YIL086C	P40503	102 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	COS12	P53053	380 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	ARE2	P53629	642 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	COG6	P53959	839 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	RRP45	Q05636	305 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	NOP6	Q07623	225 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	BMT6	Q12291	365 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	PET111	P08468	800 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	NSP1	P14907	823 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	SPO16	P17122	198 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	YCK2	P23292	546 aa	Known RBP	4.16	□□□□□ -1.74
FOX2	YKR009C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
FOX2	YKR009C	VRP1	P37370	817 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	TY4A-J	P47023	414 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	GCV1	P48015	400 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	ASK10	P48361	1146 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	YGR015C	P53208	328 aa		4.16	□□□□□ -1.74
FOX2	YKR009C	AAT1	Q01802	451 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 312.3 ms