RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W COS12P53053 380 aa3.22□□□□□ -1.89
SDH3YKL141W MDR1P53258 950 aa3.22□□□□□ -1.89
SDH3YKL141W CNM67P53865 581 aaKnown RBP3.22□□□□□ -1.89
SDH3YKL141W GIR2Q03768 265 aaPredicted RBP3.22□□□□□ -1.89
SDH3YKL141W VTI1Q04338 217 aa3.22□□□□□ -1.89
SDH3YKL141W SOV1Q04748 898 aa3.22□□□□□ -1.89
SDH3YKL141W YPR078CQ06813 372 aa3.22□□□□□ -1.89
SDH3YKL141W YOL075CQ08234 1294 aa3.22□□□□□ -1.89
SDH3YKL141W CWC2Q12046 339 aaPredicted RBP3.22□□□□□ -1.89
SDH3YKL141W RMP1Q12530 201 aa3.22□□□□□ -1.89
SDH3YKL141W FAS2P19097 1887 aaKnown RBP3.22□□□□□ -1.89
SDH3YKL141W FLO1P32768 1537 aa3.21□□□□□ -1.9
SDH3YKL141W GCG1P32656 232 aaKnown RBP3.21□□□□□ -1.9
SDH3YKL141W NIP100P33420 868 aa3.21□□□□□ -1.9
SDH3YKL141W RPC25P35718 212 aa3.21□□□□□ -1.9
SDH3YKL141W UBP13P38187 747 aa3.21□□□□□ -1.9
SDH3YKL141W SIP3P38717 1229 aa3.21□□□□□ -1.9
SDH3YKL141W TOS3P43637 560 aa3.21□□□□□ -1.9
SDH3YKL141W FMS1P50264 508 aa3.21□□□□□ -1.9
SDH3YKL141W YGR021WP53212 290 aa3.21□□□□□ -1.9
SDH3YKL141W CWC22P53333 577 aaKnown RBP3.21□□□□□ -1.9
SDH3YKL141W TOF1P53840 1238 aa3.21□□□□□ -1.9
SDH3YKL141W DIG1Q03063 452 aaKnown RBP3.21□□□□□ -1.9
SDH3YKL141W GYL1Q04322 720 aa3.21□□□□□ -1.9
SDH3YKL141W AIM33Q04516 312 aa3.21□□□□□ -1.9
SDH3YKL141W STE23Q06010 1027 aa3.21□□□□□ -1.9
SDH3YKL141W CUR1Q06469 252 aa3.21□□□□□ -1.9
SDH3YKL141W THI73Q07904 523 aa3.21□□□□□ -1.9
SDH3YKL141W APL5Q08951 932 aaKnown RBP3.21□□□□□ -1.9
SDH3YKL141W RIO1Q12196 484 aaKnown RBP3.21□□□□□ -1.9
SDH3YKL141W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
SDH3YKL141W TY1B-AO13527 1196 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W ILV1P00927 576 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W SNF1P06782 633 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W RPL42AP0CX27 106 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W RPL42BP0CX28 106 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W SAM2P19358 384 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W NIC96P34077 839 aa3.2□□□□□ -1.9
SDH3YKL141W BLI1P35727 113 aa3.2□□□□□ -1.9
SDH3YKL141W LAS1P36146 502 aaPredicted RBP3.2□□□□□ -1.9
SDH3YKL141W JNM1P36224 373 aa3.2□□□□□ -1.9
SDH3YKL141W SRP68P38687 599 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W ARN1P38731 627 aa3.2□□□□□ -1.9
SDH3YKL141W TIF4631P39935 952 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W YND1P40009 630 aa3.2□□□□□ -1.9
SDH3YKL141W MIC19P43594 170 aa3.2□□□□□ -1.9
SDH3YKL141W EAF6P47128 113 aa3.2□□□□□ -1.9
SDH3YKL141W RNR4P49723 345 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W VPS4P52917 437 aa3.2□□□□□ -1.9
SDH3YKL141W KAP114P53067 1004 aa3.2□□□□□ -1.9
SDH3YKL141W LIF1P53150 421 aa3.2□□□□□ -1.9
SDH3YKL141W PGA2P53903 129 aa3.2□□□□□ -1.9
SDH3YKL141W ESBP6P53918 673 aa3.2□□□□□ -1.9
SDH3YKL141W ACS1Q01574 713 aa3.2□□□□□ -1.9
SDH3YKL141W YMR114CQ04471 368 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W YML053CQ04978 212 aa3.2□□□□□ -1.9
SDH3YKL141W PHM6Q05637 104 aa3.2□□□□□ -1.9
SDH3YKL141W YLR297WQ05899 129 aa3.2□□□□□ -1.9
SDH3YKL141W YDL242WQ07746 117 aa3.2□□□□□ -1.9
SDH3YKL141W RLP24Q07915 199 aaKnown RBP3.2□□□□□ -1.9
SDH3YKL141W ARP6Q12509 438 aa3.2□□□□□ -1.9
SDH3YKL141W VPS5Q92331 675 aa3.2□□□□□ -1.9
SDH3YKL141W RPB2P08518 1224 aaKnown RBP3.19□□□□□ -1.9
SDH3YKL141W TCP1P12612 559 aaKnown RBP3.19□□□□□ -1.9
SDH3YKL141W CLN3P13365 580 aa3.19□□□□□ -1.9
SDH3YKL141W ATP12P22135 325 aa3.19□□□□□ -1.9
SDH3YKL141W PAP1P29468 568 aaKnown RBP3.19□□□□□ -1.9
SDH3YKL141W XRS2P33301 854 aa3.19□□□□□ -1.9
SDH3YKL141W SPP381P38282 291 aaPredicted RBP3.19□□□□□ -1.9
SDH3YKL141W RCK2P38623 610 aa3.19□□□□□ -1.9
SDH3YKL141W NAB3P38996 802 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SDH3YKL141W SPC72P39723 622 aa3.19□□□□□ -1.9
SDH3YKL141W RPC17P47076 161 aa3.19□□□□□ -1.9
SDH3YKL141W YJR079WP47126 109 aa3.19□□□□□ -1.9
SDH3YKL141W HLJ1P48353 224 aa3.19□□□□□ -1.9
SDH3YKL141W NBP1P52919 319 aaPredicted RBP3.19□□□□□ -1.9
SDH3YKL141W JJJ1P53863 590 aa3.19□□□□□ -1.9
SDH3YKL141W RPL22BP56628 122 aaKnown RBP3.19□□□□□ -1.9
SDH3YKL141W YAT1P80235 687 aa3.19□□□□□ -1.9
SDH3YKL141W YMR018WQ04364 514 aa3.19□□□□□ -1.9
SDH3YKL141W ERV41Q04651 352 aa3.19□□□□□ -1.9
SDH3YKL141W ECI1Q05871 280 aa3.19□□□□□ -1.9
SDH3YKL141W CSR1Q06705 408 aaKnown RBP3.19□□□□□ -1.9
SDH3YKL141W SIL1Q08199 421 aa3.19□□□□□ -1.9
SDH3YKL141W FLO11P08640 1367 aa3.18□□□□□ -1.9
SDH3YKL141W RAD1P06777 1100 aa3.18□□□□□ -1.9
SDH3YKL141W KGD2P19262 463 aaPredicted RBP3.18□□□□□ -1.9
SDH3YKL141W CDC10P25342 322 aaKnown RBP3.18□□□□□ -1.9
SDH3YKL141W YME1P32795 747 aa3.18□□□□□ -1.9
SDH3YKL141W YSW1P38280 609 aa3.18□□□□□ -1.9
SDH3YKL141W GDT1P38301 280 aaPredicted RBP3.18□□□□□ -1.9
SDH3YKL141W DHH1P39517 506 aaKnown RBP3.18□□□□□ -1.9
SDH3YKL141W PCL6P40038 420 aa3.18□□□□□ -1.9
SDH3YKL141W GPD2P41911 440 aaKnown RBP3.18□□□□□ -1.9
SDH3YKL141W TRS85P46944 698 aa3.18□□□□□ -1.9
SDH3YKL141W MTG1Q03151 367 aaPredicted RBP3.18□□□□□ -1.9
SDH3YKL141W YMR102CQ03177 834 aa3.18□□□□□ -1.9
SDH3YKL141W URH1Q04179 340 aa3.18□□□□□ -1.9
SDH3YKL141W DON1Q05610 365 aa3.18□□□□□ -1.9
SDH3YKL141W SUE1Q06524 206 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms