RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C GYL1Q04322 720 aa1.57□□□□□ -2.16
VPS55YJR044C BUD22Q04347 519 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C ENT4Q07872 247 aa1.57□□□□□ -2.16
VPS55YJR044C TMA16Q08687 178 aa1.57□□□□□ -2.16
VPS55YJR044C RIM20Q12033 661 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-BQ12260 438 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-OR2Q12293 438 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-DR1Q12392 438 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-OR1Q12439 438 aa1.57□□□□□ -2.16
VPS55YJR044C RVB2Q12464 471 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C NOP58Q12499 511 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C TY2A-DR3Q99303 438 aa1.57□□□□□ -2.16
VPS55YJR044C YML133CQ03099 1374 aa1.57□□□□□ -2.16
VPS55YJR044C YLL067CQ07888 1374 aa1.57□□□□□ -2.16
VPS55YJR044C YLL066CQ99208 1374 aa1.57□□□□□ -2.16
VPS55YJR044C SUI3P09064 285 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C CBS1P14066 229 aa1.56□□□□□ -2.16
VPS55YJR044C PDX1P16451 410 aa1.56□□□□□ -2.16
VPS55YJR044C SRV2P17555 526 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C YCK1P23291 538 aa1.56□□□□□ -2.16
VPS55YJR044C VMA16P23968 213 aa1.56□□□□□ -2.16
VPS55YJR044C MNE1P24720 663 aa1.56□□□□□ -2.16
VPS55YJR044C YSP3P25036 478 aa1.56□□□□□ -2.16
VPS55YJR044C LCB1P25045 558 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C POL4P25615 582 aa1.56□□□□□ -2.16
VPS55YJR044C MRP20P32387 263 aa1.56□□□□□ -2.16
VPS55YJR044C CBF2P32504 956 aa1.56□□□□□ -2.16
VPS55YJR044C TFB1P32776 642 aa1.56□□□□□ -2.16
VPS55YJR044C SAS3P34218 831 aa1.56□□□□□ -2.16
VPS55YJR044C YKL100CP34248 587 aa1.56□□□□□ -2.16
VPS55YJR044C UBP11P36026 717 aa1.56□□□□□ -2.16
VPS55YJR044C ALY1P36117 915 aa1.56□□□□□ -2.16
VPS55YJR044C AGP2P38090 596 aa1.56□□□□□ -2.16
VPS55YJR044C RRT2P38332 387 aa1.56□□□□□ -2.16
VPS55YJR044C OTU2P38747 307 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C APE4P38821 490 aa1.56□□□□□ -2.16
VPS55YJR044C POP2P39008 433 aa1.56□□□□□ -2.16
VPS55YJR044C GDI1P39958 451 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C YJL068CP40363 299 aa1.56□□□□□ -2.16
VPS55YJR044C SPO22P40511 975 aa1.56□□□□□ -2.16
VPS55YJR044C DJP1P40564 432 aa1.56□□□□□ -2.16
VPS55YJR044C AXL1P40851 1208 aa1.56□□□□□ -2.16
VPS55YJR044C SPG5P42933 373 aa1.56□□□□□ -2.16
VPS55YJR044C YML6P51998 286 aa1.56□□□□□ -2.16
VPS55YJR044C RRT6P53117 311 aaPredicted RBP1.56□□□□□ -2.16
VPS55YJR044C ASI1P54074 624 aa1.56□□□□□ -2.16
VPS55YJR044C CIK1Q01649 594 aa1.56□□□□□ -2.16
VPS55YJR044C YSA1Q01976 231 aa1.56□□□□□ -2.16
VPS55YJR044C RCO1Q04779 684 aa1.56□□□□□ -2.16
VPS55YJR044C STP3Q05937 343 aa1.56□□□□□ -2.16
VPS55YJR044C YLR455WQ06188 304 aa1.56□□□□□ -2.16
VPS55YJR044C IMH1Q06704 911 aaKnown RBP1.56□□□□□ -2.16
VPS55YJR044C SWT1Q12104 458 aa1.56□□□□□ -2.16
VPS55YJR044C RTN2Q12443 393 aa1.56□□□□□ -2.16
VPS55YJR044C PCD1Q12524 340 aa1.56□□□□□ -2.16
VPS55YJR044C YRF1-4O13559 1382 aa1.56□□□□□ -2.16
VPS55YJR044C YBR085C-AO43137 85 aa1.55□□□□□ -2.16
VPS55YJR044C HSP82P02829 709 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C CHO1P08456 276 aa1.55□□□□□ -2.16
VPS55YJR044C OLE1P21147 510 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C PWP1P21304 576 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C ERG8P24521 451 aa1.55□□□□□ -2.16
VPS55YJR044C STE50P25344 346 aa1.55□□□□□ -2.16
VPS55YJR044C RPC53P25441 422 aa1.55□□□□□ -2.16
VPS55YJR044C BUD14P27637 709 aa1.55□□□□□ -2.16
VPS55YJR044C PAP1P29468 568 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C RPN2P32565 945 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C ANP1P32629 500 aa1.55□□□□□ -2.16
VPS55YJR044C MDL1P33310 695 aa1.55□□□□□ -2.16
VPS55YJR044C ESL2P36168 1195 aa1.55□□□□□ -2.16
VPS55YJR044C MAL33P38157 468 aa1.55□□□□□ -2.16
VPS55YJR044C FLC2P39719 783 aa1.55□□□□□ -2.16
VPS55YJR044C TIF4631P39935 952 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C BUD16P39988 312 aa1.55□□□□□ -2.16
VPS55YJR044C MPP10P47083 593 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C MRX6P48564 524 aa1.55□□□□□ -2.16
VPS55YJR044C VPS4P52917 437 aa1.55□□□□□ -2.16
VPS55YJR044C VID30P53076 958 aa1.55□□□□□ -2.16
VPS55YJR044C LCL3P53153 274 aa1.55□□□□□ -2.16
VPS55YJR044C YGR066CP53242 292 aa1.55□□□□□ -2.16
VPS55YJR044C YNL181WP53878 407 aa1.55□□□□□ -2.16
VPS55YJR044C ZDS2P54786 942 aa1.55□□□□□ -2.16
VPS55YJR044C VPS9P54787 451 aa1.55□□□□□ -2.16
VPS55YJR044C YML037CQ03703 340 aa1.55□□□□□ -2.16
VPS55YJR044C YDR239CQ03780 787 aa1.55□□□□□ -2.16
VPS55YJR044C YDR415CQ04033 374 aaPredicted RBP1.55□□□□□ -2.16
VPS55YJR044C GTB1Q04924 702 aa1.55□□□□□ -2.16
VPS55YJR044C YDR341CQ05506 607 aaKnown RBP1.55□□□□□ -2.16
VPS55YJR044C UTP21Q06078 939 aaPredicted RBP1.55□□□□□ -2.16
VPS55YJR044C SKG3Q06315 1026 aa1.55□□□□□ -2.16
VPS55YJR044C PSR1Q07800 427 aa1.55□□□□□ -2.16
VPS55YJR044C SUL2Q12325 893 aa1.55□□□□□ -2.16
VPS55YJR044C HXK2P04807 486 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C RPB2P08518 1224 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C MRP2P10663 115 aaPredicted RBP1.54□□□□□ -2.16
VPS55YJR044C EST1P17214 699 aaPredicted RBP1.54□□□□□ -2.16
VPS55YJR044C SUI2P20459 304 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C SPE2P21182 396 aa1.54□□□□□ -2.16
VPS55YJR044C TRX1P22217 103 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C ROX1P25042 368 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms