RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C HEM12P32347 362 aaPredicted RBP3.35□□□□□ -1.87
SHQ1YIL104C IMP3P32899 183 aaPredicted RBP3.35□□□□□ -1.87
SHQ1YIL104C UBC6P33296 250 aaPredicted RBP3.35□□□□□ -1.87
SHQ1YIL104C SET3P36124 751 aa3.35□□□□□ -1.87
SHQ1YIL104C SPP381P38282 291 aaPredicted RBP3.35□□□□□ -1.87
SHQ1YIL104C YBR259WP38338 688 aa3.35□□□□□ -1.87
SHQ1YIL104C YHL012WP38709 493 aa3.35□□□□□ -1.87
SHQ1YIL104C YHR078WP38799 552 aa3.35□□□□□ -1.87
SHQ1YIL104C FMO1P38866 432 aa3.35□□□□□ -1.87
SHQ1YIL104C CCT2P39076 527 aaKnown RBP3.35□□□□□ -1.87
SHQ1YIL104C MNN1P39106 762 aa3.35□□□□□ -1.87
SHQ1YIL104C BOL3P39724 118 aa3.35□□□□□ -1.87
SHQ1YIL104C RGI2P40188 164 aa3.35□□□□□ -1.87
SHQ1YIL104C TIF34P40217 347 aaKnown RBP3.35□□□□□ -1.87
SHQ1YIL104C PFK26P40433 827 aaKnown RBP3.35□□□□□ -1.87
SHQ1YIL104C SIP4P46954 829 aa3.35□□□□□ -1.87
SHQ1YIL104C RTA1P53047 317 aa3.35□□□□□ -1.87
SHQ1YIL104C PCL10P53124 433 aa3.35□□□□□ -1.87
SHQ1YIL104C YNL143CP53908 130 aa3.35□□□□□ -1.87
SHQ1YIL104C NOP15P53927 220 aaPredicted RBP3.35□□□□□ -1.87
SHQ1YIL104C AAT1Q01802 451 aa3.35□□□□□ -1.87
SHQ1YIL104C CDC123Q05791 360 aa3.35□□□□□ -1.87
SHQ1YIL104C FRT1Q99332 602 aa3.35□□□□□ -1.87
SHQ1YIL104C YMR085WP0CF18 432 aa3.34□□□□□ -1.87
SHQ1YIL104C NSP1P14907 823 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C SPO16P17122 198 aa3.34□□□□□ -1.87
SHQ1YIL104C ATP12P22135 325 aa3.34□□□□□ -1.87
SHQ1YIL104C UBA1P22515 1024 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C VPS34P22543 875 aa3.34□□□□□ -1.87
SHQ1YIL104C KAR4P25583 335 aa3.34□□□□□ -1.87
SHQ1YIL104C NDI1P32340 513 aa3.34□□□□□ -1.87
SHQ1YIL104C SPS19P32573 292 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C YME1P32795 747 aa3.34□□□□□ -1.87
SHQ1YIL104C TFC3P34111 1160 aa3.34□□□□□ -1.87
SHQ1YIL104C YPT53P36019 220 aa3.34□□□□□ -1.87
SHQ1YIL104C SRX1P36077 127 aa3.34□□□□□ -1.87
SHQ1YIL104C YKL077WP36081 392 aa3.34□□□□□ -1.87
SHQ1YIL104C MRP21P38175 177 aa3.34□□□□□ -1.87
SHQ1YIL104C LDB7P38210 180 aa3.34□□□□□ -1.87
SHQ1YIL104C YBR032WP38223 100 aa3.34□□□□□ -1.87
SHQ1YIL104C IML3P38265 245 aa3.34□□□□□ -1.87
SHQ1YIL104C TAE1P38340 232 aa3.34□□□□□ -1.87
SHQ1YIL104C PCL5P38794 229 aa3.34□□□□□ -1.87
SHQ1YIL104C SPC97P38863 823 aa3.34□□□□□ -1.87
SHQ1YIL104C BAT1P38891 393 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C YDR089WP38966 869 aa3.34□□□□□ -1.87
SHQ1YIL104C ALG8P40351 577 aa3.34□□□□□ -1.87
SHQ1YIL104C YPS6P40583 537 aa3.34□□□□□ -1.87
SHQ1YIL104C CTK3P46963 296 aaPredicted RBP3.34□□□□□ -1.87
SHQ1YIL104C YJR039WP47107 1121 aa3.34□□□□□ -1.87
SHQ1YIL104C MNN10P50108 393 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C ZIP2P53061 704 aa3.34□□□□□ -1.87
SHQ1YIL104C SPC105P53148 917 aa3.34□□□□□ -1.87
SHQ1YIL104C PEX8P53248 589 aa3.34□□□□□ -1.87
SHQ1YIL104C CPR6P53691 371 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C YMR178WQ03219 274 aaKnown RBP3.34□□□□□ -1.87
SHQ1YIL104C ROT1Q03691 256 aa3.34□□□□□ -1.87
SHQ1YIL104C YOR352WQ08816 343 aa3.34□□□□□ -1.87
SHQ1YIL104C HOS1Q12214 470 aa3.34□□□□□ -1.87
SHQ1YIL104C YPL247CQ12523 523 aa3.34□□□□□ -1.87
SHQ1YIL104C FMP27Q06179 2628 aa3.34□□□□□ -1.88
SHQ1YIL104C INH1P01097 85 aa3.34□□□□□ -1.88
SHQ1YIL104C APA1P16550 321 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C HSP60P19882 572 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C EMC1P25574 760 aa3.34□□□□□ -1.88
SHQ1YIL104C NRP1P32770 719 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
SHQ1YIL104C YSC84P32793 468 aa3.34□□□□□ -1.88
SHQ1YIL104C SOL2P37262 315 aa3.34□□□□□ -1.88
SHQ1YIL104C OLA1P38219 394 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C SRP72P38688 640 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C MPT5P39016 859 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
SHQ1YIL104C PEP8P40335 379 aa3.34□□□□□ -1.88
SHQ1YIL104C PXA1P41909 870 aa3.34□□□□□ -1.88
SHQ1YIL104C YFR020WP43600 232 aa3.34□□□□□ -1.88
SHQ1YIL104C STB2P46679 850 aa3.34□□□□□ -1.88
SHQ1YIL104C SWC4P53201 476 aa3.34□□□□□ -1.88
SHQ1YIL104C LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C BIO4P53630 237 aa3.34□□□□□ -1.88
SHQ1YIL104C YMR209CQ03648 457 aa3.34□□□□□ -1.88
SHQ1YIL104C PPN1Q04119 674 aa3.34□□□□□ -1.88
SHQ1YIL104C HBT1Q07653 1046 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C HRK1Q08732 759 aaKnown RBP3.34□□□□□ -1.88
SHQ1YIL104C SRO7Q12038 1033 aa3.34□□□□□ -1.88
SHQ1YIL104C NUS1Q12063 375 aa3.34□□□□□ -1.88
SHQ1YIL104C PST1Q12355 444 aa3.34□□□□□ -1.88
SHQ1YIL104C RPS9AO13516 197 aaKnown RBP3.33□□□□□ -1.88
SHQ1YIL104C SUC2P00724 532 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-LR4P0C2I8 440 aaKnown RBP3.33□□□□□ -1.88
SHQ1YIL104C SSC1P0CS90 654 aaKnown RBP3.33□□□□□ -1.88
SHQ1YIL104C TY1A-DR6P0CX70 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-ER1P0CX71 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-LR2P0CX72 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-PLP0CX73 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-JR1P0CX74 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-LR3P0CX75 440 aa3.33□□□□□ -1.88
SHQ1YIL104C TY1A-ML2P0CX76 440 aa3.33□□□□□ -1.88
SHQ1YIL104C SAM35P14693 329 aa3.33□□□□□ -1.88
SHQ1YIL104C EPT1P22140 391 aa3.33□□□□□ -1.88
SHQ1YIL104C PHO84P25297 587 aaKnown RBP3.33□□□□□ -1.88
SHQ1YIL104C HRR25P29295 494 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms