RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A CYB2P00175 591 aa3.39□□□□□ -1.87
EFG1YGR271C-A UBC1P21734 215 aaKnown RBP3.39□□□□□ -1.87
EFG1YGR271C-A SAN1P22470 610 aa3.39□□□□□ -1.87
EFG1YGR271C-A VPH1P32563 840 aaKnown RBP3.39□□□□□ -1.87
EFG1YGR271C-A PAH1P32567 862 aa3.39□□□□□ -1.87
EFG1YGR271C-A XRS2P33301 854 aa3.39□□□□□ -1.87
EFG1YGR271C-A MRPL36P36531 177 aa3.39□□□□□ -1.87
EFG1YGR271C-A UBA4P38820 440 aa3.39□□□□□ -1.87
EFG1YGR271C-A CAJ1P39101 391 aa3.39□□□□□ -1.87
EFG1YGR271C-A NOP16P40007 231 aaKnown RBP3.39□□□□□ -1.87
EFG1YGR271C-A KAP123P40069 1113 aaKnown RBP3.39□□□□□ -1.87
EFG1YGR271C-A SOL4P53315 255 aa3.39□□□□□ -1.87
EFG1YGR271C-A ARP6Q12509 438 aa3.39□□□□□ -1.87
EFG1YGR271C-A ENT1Q12518 454 aa3.39□□□□□ -1.87
EFG1YGR271C-A SPT7P35177 1332 aa3.39□□□□□ -1.87
EFG1YGR271C-A TPK1P06244 397 aa3.38□□□□□ -1.87
EFG1YGR271C-A FUR1P18562 216 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A PGS1P25578 521 aa3.38□□□□□ -1.87
EFG1YGR271C-A KRR1P25586 316 aaPredicted RBP3.38□□□□□ -1.87
EFG1YGR271C-A CMK1P27466 446 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A SNU114P36048 1008 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A DED81P38707 554 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A UIP3P39547 235 aa3.38□□□□□ -1.87
EFG1YGR271C-A YTA12P40341 825 aa3.38□□□□□ -1.87
EFG1YGR271C-A YJL068CP40363 299 aa3.38□□□□□ -1.87
EFG1YGR271C-A GPD2P41911 440 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A UPF3P48412 387 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A YGR016WP53209 190 aa3.38□□□□□ -1.87
EFG1YGR271C-A RBG2P53295 368 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A ERP1Q05359 219 aaKnown RBP3.38□□□□□ -1.87
EFG1YGR271C-A YLR287CQ05881 355 aa3.38□□□□□ -1.87
EFG1YGR271C-A HXK2P04807 486 aaKnown RBP3.37□□□□□ -1.87
EFG1YGR271C-A RPL15AP05748 204 aaKnown RBP3.37□□□□□ -1.87
EFG1YGR271C-A TPM1P17536 199 aaKnown RBP3.37□□□□□ -1.87
EFG1YGR271C-A BRF1P29056 596 aa3.37□□□□□ -1.87
EFG1YGR271C-A RAD16P31244 790 aa3.37□□□□□ -1.87
EFG1YGR271C-A ACH1P32316 526 aa3.37□□□□□ -1.87
EFG1YGR271C-A SLC1P33333 303 aa3.37□□□□□ -1.87
EFG1YGR271C-A YKL100CP34248 587 aa3.37□□□□□ -1.87
EFG1YGR271C-A MUD2P36084 527 aaKnown RBP3.37□□□□□ -1.87
EFG1YGR271C-A AGP2P38090 596 aa3.37□□□□□ -1.87
EFG1YGR271C-A IFA38P38286 347 aa3.37□□□□□ -1.87
EFG1YGR271C-A PES4P39684 611 aa3.37□□□□□ -1.87
EFG1YGR271C-A PSF2P40359 213 aa3.37□□□□□ -1.87
EFG1YGR271C-A SMK1P41808 388 aa3.37□□□□□ -1.87
EFG1YGR271C-A YML6P51998 286 aa3.37□□□□□ -1.87
EFG1YGR271C-A VPS4P52917 437 aa3.37□□□□□ -1.87
EFG1YGR271C-A COS10P52924 374 aa3.37□□□□□ -1.87
EFG1YGR271C-A NNF2P53253 936 aa3.37□□□□□ -1.87
EFG1YGR271C-A MRPL19P53875 158 aa3.37□□□□□ -1.87
EFG1YGR271C-A MSS11Q03825 758 aa3.37□□□□□ -1.87
EFG1YGR271C-A CSR1Q06705 408 aaKnown RBP3.37□□□□□ -1.87
EFG1YGR271C-A PSR1Q07800 427 aa3.37□□□□□ -1.87
EFG1YGR271C-A YEH2Q07950 538 aa3.37□□□□□ -1.87
EFG1YGR271C-A HSH49Q99181 213 aaPredicted RBP3.37□□□□□ -1.87
EFG1YGR271C-A SEM1O94742 89 aa3.36□□□□□ -1.87
EFG1YGR271C-A AAC3P18238 307 aa3.36□□□□□ -1.87
EFG1YGR271C-A TYR1P20049 452 aa3.36□□□□□ -1.87
EFG1YGR271C-A NPL6P32832 435 aa3.36□□□□□ -1.87
EFG1YGR271C-A SRP72P38688 640 aaKnown RBP3.36□□□□□ -1.87
EFG1YGR271C-A RIC1P40395 1056 aa3.36□□□□□ -1.87
EFG1YGR271C-A PFK26P40433 827 aaKnown RBP3.36□□□□□ -1.87
EFG1YGR271C-A IST3P40565 148 aaPredicted RBP3.36□□□□□ -1.87
EFG1YGR271C-A IRC6P43615 237 aa3.36□□□□□ -1.87
EFG1YGR271C-A DPB11P47027 764 aaPredicted RBP3.36□□□□□ -1.87
EFG1YGR271C-A GPI8P49018 411 aa3.36□□□□□ -1.87
EFG1YGR271C-A BTN2P53286 410 aa3.36□□□□□ -1.87
EFG1YGR271C-A MRPL13Q02204 264 aa3.36□□□□□ -1.87
EFG1YGR271C-A INA17Q02888 182 aa3.36□□□□□ -1.87
EFG1YGR271C-A PRP3Q03338 469 aaPredicted RBP3.36□□□□□ -1.87
EFG1YGR271C-A TAF11Q04226 346 aa3.36□□□□□ -1.87
EFG1YGR271C-A YKU80Q04437 629 aa3.36□□□□□ -1.87
EFG1YGR271C-A RRG1Q12167 365 aaPredicted RBP3.36□□□□□ -1.87
EFG1YGR271C-A YLL056CQ12177 298 aa3.36□□□□□ -1.87
EFG1YGR271C-A INP53Q12271 1107 aa3.36□□□□□ -1.87
EFG1YGR271C-A ERG27Q12452 347 aaKnown RBP3.36□□□□□ -1.87
EFG1YGR271C-A REV1P12689 985 aa3.35□□□□□ -1.87
EFG1YGR271C-A CDC15P27636 974 aa3.35□□□□□ -1.87
EFG1YGR271C-A MCM4P30665 933 aaKnown RBP3.35□□□□□ -1.87
EFG1YGR271C-A LRP1P38801 184 aaKnown RBP3.35□□□□□ -1.87
EFG1YGR271C-A SPG5P42933 373 aa3.35□□□□□ -1.87
EFG1YGR271C-A YPI1P43587 155 aa3.35□□□□□ -1.87
EFG1YGR271C-A ATP22P50273 684 aaPredicted RBP3.35□□□□□ -1.87
EFG1YGR271C-A TDA7P53882 636 aaPredicted RBP3.35□□□□□ -1.87
EFG1YGR271C-A SYF1Q04048 859 aaPredicted RBP3.35□□□□□ -1.87
EFG1YGR271C-A RBA50Q04418 439 aa3.35□□□□□ -1.87
EFG1YGR271C-A APL4Q12028 832 aa3.35□□□□□ -1.87
EFG1YGR271C-A NUC1P08466 329 aa3.34□□□□□ -1.87
EFG1YGR271C-A MET8P15807 274 aa3.34□□□□□ -1.87
EFG1YGR271C-A ERG8P24521 451 aa3.34□□□□□ -1.87
EFG1YGR271C-A RXT2P38255 430 aa3.34□□□□□ -1.87
EFG1YGR271C-A RRP3P38712 501 aaKnown RBP3.34□□□□□ -1.87
EFG1YGR271C-A YEL068CP39977 110 aa3.34□□□□□ -1.87
EFG1YGR271C-A JEM1P40358 645 aa3.34□□□□□ -1.87
EFG1YGR271C-A SEC24P40482 926 aaKnown RBP3.34□□□□□ -1.87
EFG1YGR271C-A DPH1P40487 425 aaKnown RBP3.34□□□□□ -1.87
EFG1YGR271C-A YJL213WP40896 331 aa3.34□□□□□ -1.87
EFG1YGR271C-A PYK2P52489 506 aaKnown RBP3.34□□□□□ -1.87
EFG1YGR271C-A RRT6P53117 311 aaPredicted RBP3.34□□□□□ -1.87
EFG1YGR271C-A REG1Q00816 1014 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms