RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C HXT4P32467 576 aa3.86□□□□□ -1.79
OTU1YFL044C PET309P32522 965 aaPredicted RBP3.86□□□□□ -1.79
OTU1YFL044C WBP1P33767 430 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C APT2P36973 181 aa3.86□□□□□ -1.79
OTU1YFL044C SIC1P38634 284 aa3.86□□□□□ -1.79
OTU1YFL044C RPP1P38786 293 aa3.86□□□□□ -1.79
OTU1YFL044C YER130CP39959 443 aa3.86□□□□□ -1.79
OTU1YFL044C YEL075CP39972 122 aa3.86□□□□□ -1.79
OTU1YFL044C FET5P43561 622 aa3.86□□□□□ -1.79
OTU1YFL044C STU2P46675 888 aa3.86□□□□□ -1.79
OTU1YFL044C PEX31P53203 462 aa3.86□□□□□ -1.79
OTU1YFL044C YGR266WP53326 701 aa3.86□□□□□ -1.79
OTU1YFL044C TRM112P53738 135 aaPredicted RBP3.86□□□□□ -1.79
OTU1YFL044C PRM1P53835 661 aa3.86□□□□□ -1.79
OTU1YFL044C YNL144CP53907 740 aa3.86□□□□□ -1.79
OTU1YFL044C SWS2P53937 143 aa3.86□□□□□ -1.79
OTU1YFL044C AQR1P53943 586 aa3.86□□□□□ -1.79
OTU1YFL044C GTR1Q00582 310 aa3.86□□□□□ -1.79
OTU1YFL044C YPL113CQ02961 396 aa3.86□□□□□ -1.79
OTU1YFL044C NRG1Q03125 231 aa3.86□□□□□ -1.79
OTU1YFL044C EBS1Q03466 884 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C TRM82Q03774 444 aa3.86□□□□□ -1.79
OTU1YFL044C GRX8Q05926 109 aa3.86□□□□□ -1.79
OTU1YFL044C THI20Q08224 551 aa3.86□□□□□ -1.79
OTU1YFL044C ETT1Q08421 412 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C RPN8Q08723 338 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C SRO7Q12038 1033 aa3.86□□□□□ -1.79
OTU1YFL044C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
OTU1YFL044C YLR046CQ12253 270 aa3.86□□□□□ -1.79
OTU1YFL044C SEC16P48415 2195 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C YPK1P12688 680 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C DAL81P21657 970 aa3.85□□□□□ -1.79
OTU1YFL044C PHO3P24031 467 aa3.85□□□□□ -1.79
OTU1YFL044C GEX1P25596 615 aa3.85□□□□□ -1.79
OTU1YFL044C SRB2P34162 210 aa3.85□□□□□ -1.79
OTU1YFL044C CTF13P35203 478 aa3.85□□□□□ -1.79
OTU1YFL044C GEX2P36173 615 aa3.85□□□□□ -1.79
OTU1YFL044C KAP104P38217 918 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C YBR259WP38338 688 aa3.85□□□□□ -1.79
OTU1YFL044C LYS9P38999 446 aa3.85□□□□□ -1.79
OTU1YFL044C PRM9P39551 298 aa3.85□□□□□ -1.79
OTU1YFL044C SCS2P40075 244 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C TMA108P40462 946 aa3.85□□□□□ -1.79
OTU1YFL044C SER33P40510 469 aa3.85□□□□□ -1.79
OTU1YFL044C DSN1P40568 576 aa3.85□□□□□ -1.79
OTU1YFL044C SNZ3P43545 298 aa3.85□□□□□ -1.79
OTU1YFL044C SNG1P46950 547 aa3.85□□□□□ -1.79
OTU1YFL044C SET2P46995 733 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C NRM1P53718 249 aa3.85□□□□□ -1.79
OTU1YFL044C SNZ2P53824 298 aa3.85□□□□□ -1.79
OTU1YFL044C KTR6P54070 446 aa3.85□□□□□ -1.79
OTU1YFL044C SLU7Q02775 382 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C GFD1Q04839 188 aaKnown RBP3.85□□□□□ -1.79
OTU1YFL044C YLR456WQ06199 204 aa3.85□□□□□ -1.79
OTU1YFL044C YFT2Q06676 274 aa3.85□□□□□ -1.79
OTU1YFL044C AAD4Q07747 329 aa3.85□□□□□ -1.79
OTU1YFL044C AIM39Q08223 395 aa3.85□□□□□ -1.79
OTU1YFL044C YIL046W-AQ3E7Z4 54 aa3.85□□□□□ -1.79
OTU1YFL044C NAG1Q8TGN9 163 aa3.85□□□□□ -1.79
OTU1YFL044C RPS17AP02407 136 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C BI2P03873 423 aa3.84□□□□□ -1.79
OTU1YFL044C RIP1P08067 215 aa3.84□□□□□ -1.79
OTU1YFL044C RPS17BP14127 136 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C DGR2P32330 852 aa3.84□□□□□ -1.79
OTU1YFL044C DCG1P32460 244 aa3.84□□□□□ -1.79
OTU1YFL044C PMT1P33775 817 aa3.84□□□□□ -1.79
OTU1YFL044C SHM2P37291 469 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C ADE17P38009 592 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C APM3P38153 483 aa3.84□□□□□ -1.79
OTU1YFL044C MUM2P38236 366 aa3.84□□□□□ -1.79
OTU1YFL044C FSH1P38777 243 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C SAW1P39735 261 aa3.84□□□□□ -1.79
OTU1YFL044C STL1P39932 569 aa3.84□□□□□ -1.79
OTU1YFL044C EDC3P39998 551 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C YJL070CP40361 888 aa3.84□□□□□ -1.79
OTU1YFL044C MNT3P40549 630 aa3.84□□□□□ -1.79
OTU1YFL044C IRC5P43610 853 aa3.84□□□□□ -1.79
OTU1YFL044C MAD3P47074 515 aa3.84□□□□□ -1.79
OTU1YFL044C YTP1P53584 459 aa3.84□□□□□ -1.79
OTU1YFL044C SUN4P53616 420 aa3.84□□□□□ -1.79
OTU1YFL044C PIR1Q03178 341 aa3.84□□□□□ -1.79
OTU1YFL044C YMR210WQ03649 449 aa3.84□□□□□ -1.79
OTU1YFL044C SXM1Q04175 944 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C HLR1Q04429 423 aa3.84□□□□□ -1.79
OTU1YFL044C ERV41Q04651 352 aa3.84□□□□□ -1.79
OTU1YFL044C BLS1Q06071 122 aa3.84□□□□□ -1.79
OTU1YFL044C YPS7Q06325 596 aa3.84□□□□□ -1.79
OTU1YFL044C MCH5Q08777 521 aa3.84□□□□□ -1.79
OTU1YFL044C YDR056CQ12025 205 aa3.84□□□□□ -1.79
OTU1YFL044C LSP1Q12230 341 aaKnown RBP3.84□□□□□ -1.79
OTU1YFL044C EMP46Q12396 444 aa3.84□□□□□ -1.79
OTU1YFL044C PEX11Q12462 236 aa3.84□□□□□ -1.79
OTU1YFL044C VPS5Q92331 675 aa3.84□□□□□ -1.79
OTU1YFL044C BI3Q9ZZW7 517 aa3.84□□□□□ -1.79
OTU1YFL044C HIS1P00498 297 aaKnown RBP3.83□□□□□ -1.8
OTU1YFL044C SUC2P00724 532 aa3.83□□□□□ -1.8
OTU1YFL044C PAB1P04147 577 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
OTU1YFL044C CDC37P06101 506 aaKnown RBP3.83□□□□□ -1.8
OTU1YFL044C RPL1AP0CX43 217 aaKnown RBP3.83□□□□□ -1.8
OTU1YFL044C RPL1BP0CX44 217 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms