RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C NUP85P46673 744 aa5.68□□□□□ -1.5
SEC20YDR498C PET130P47065 347 aa5.68□□□□□ -1.5
SEC20YDR498C NOP9P47077 666 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C EMC4P53073 190 aa5.68□□□□□ -1.5
SEC20YDR498C AIM14P53109 570 aa5.68□□□□□ -1.5
SEC20YDR498C YNL010WP53981 241 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C DOS2P54858 310 aa5.68□□□□□ -1.5
SEC20YDR498C PEX13P80667 386 aa5.68□□□□□ -1.5
SEC20YDR498C RSC4Q02206 625 aa5.68□□□□□ -1.5
SEC20YDR498C HEH2Q03281 663 aa5.68□□□□□ -1.5
SEC20YDR498C HPT1Q04178 221 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C TMN2Q04562 672 aa5.68□□□□□ -1.5
SEC20YDR498C SLF1Q12034 447 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C MNL2Q12205 849 aa5.68□□□□□ -1.5
SEC20YDR498C SUC2P00724 532 aa5.67□□□□□ -1.5
SEC20YDR498C ATP6P00854 259 aa5.67□□□□□ -1.5
SEC20YDR498C TRP3P00937 484 aa5.67□□□□□ -1.5
SEC20YDR498C SPT3P06844 337 aa5.67□□□□□ -1.5
SEC20YDR498C SST2P11972 698 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C DAT1P13483 248 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C PDC5P16467 563 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C PHO81P17442 1178 aa5.67□□□□□ -1.5
SEC20YDR498C DBR1P24309 405 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C SGF29P25554 259 aa5.67□□□□□ -1.5
SEC20YDR498C GBP2P25555 427 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SEC20YDR498C PEX34P25584 144 aa5.67□□□□□ -1.5
SEC20YDR498C CSE1P33307 960 aa5.67□□□□□ -1.5
SEC20YDR498C SKT5P34226 696 aa5.67□□□□□ -1.5
SEC20YDR498C CTF13P35203 478 aa5.67□□□□□ -1.5
SEC20YDR498C GIP4P39732 760 aa5.67□□□□□ -1.5
SEC20YDR498C MET18P40469 1032 aa5.67□□□□□ -1.5
SEC20YDR498C SEC27P41811 889 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C GCD14P46959 383 aaPredicted RBP5.67□□□□□ -1.5
SEC20YDR498C COS6P53344 381 aa5.67□□□□□ -1.5
SEC20YDR498C YNL143CP53908 130 aa5.67□□□□□ -1.5
SEC20YDR498C EFM6P53970 246 aa5.67□□□□□ -1.5
SEC20YDR498C RPM2Q02773 1202 aa5.67□□□□□ -1.5
SEC20YDR498C YMR111CQ04461 462 aaPredicted RBP5.67□□□□□ -1.5
SEC20YDR498C HEL2Q05580 639 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C LCB5Q06147 687 aaKnown RBP5.67□□□□□ -1.5
SEC20YDR498C NUT2Q06213 157 aa5.67□□□□□ -1.5
SEC20YDR498C VAM6Q07468 1049 aa5.67□□□□□ -1.5
SEC20YDR498C HSH49Q99181 213 aaPredicted RBP5.67□□□□□ -1.5
SEC20YDR498C BEM2P39960 2167 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C RPP2BP02400 110 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C YCK2P23292 546 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C EMC1P25574 760 aa5.66□□□□□ -1.5
SEC20YDR498C SWH1P35845 1188 aa5.66□□□□□ -1.5
SEC20YDR498C FTH1P38310 465 aa5.66□□□□□ -1.5
SEC20YDR498C EFM1P38732 585 aa5.66□□□□□ -1.5
SEC20YDR498C YHR045WP38775 560 aa5.66□□□□□ -1.5
SEC20YDR498C ERG10P41338 398 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C AIM23P47015 356 aa5.66□□□□□ -1.5
SEC20YDR498C IMA1P53051 589 aa5.66□□□□□ -1.5
SEC20YDR498C CLD1P53264 445 aa5.66□□□□□ -1.5
SEC20YDR498C PRM1P53835 661 aa5.66□□□□□ -1.5
SEC20YDR498C NAN1Q02931 896 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C YML131WQ03102 365 aa5.66□□□□□ -1.5
SEC20YDR498C SEG1Q04279 960 aa5.66□□□□□ -1.5
SEC20YDR498C YLR346CQ06139 101 aa5.66□□□□□ -1.5
SEC20YDR498C BCP1Q06338 283 aa5.66□□□□□ -1.5
SEC20YDR498C OPT2Q06593 877 aa5.66□□□□□ -1.5
SEC20YDR498C YLR413WQ06689 675 aa5.66□□□□□ -1.5
SEC20YDR498C YOL159CQ08300 171 aa5.66□□□□□ -1.5
SEC20YDR498C RSB1Q08417 382 aa5.66□□□□□ -1.5
SEC20YDR498C SGO1Q08490 590 aa5.66□□□□□ -1.5
SEC20YDR498C HRK1Q08732 759 aaKnown RBP5.66□□□□□ -1.5
SEC20YDR498C YIG1Q08956 461 aa5.66□□□□□ -1.5
SEC20YDR498C YLR049CQ12110 428 aa5.66□□□□□ -1.5
SEC20YDR498C PST1Q12355 444 aa5.66□□□□□ -1.5
SEC20YDR498C JLP1Q12358 412 aa5.66□□□□□ -1.5
SEC20YDR498C RRP36Q12481 300 aaPredicted RBP5.66□□□□□ -1.5
SEC20YDR498C YDR034W-BQ6Q5X2 51 aa5.66□□□□□ -1.5
SEC20YDR498C FRT1Q99332 602 aa5.66□□□□□ -1.5
SEC20YDR498C HMG2P12684 1045 aa5.65□□□□□ -1.5
SEC20YDR498C YAP1P19880 650 aaKnown RBP5.65□□□□□ -1.5
SEC20YDR498C ZIP1P31111 875 aa5.65□□□□□ -1.5
SEC20YDR498C MF(ALPHA)2P32435 120 aa5.65□□□□□ -1.5
SEC20YDR498C PTH2P34222 208 aa5.65□□□□□ -1.5
SEC20YDR498C SOL2P37262 315 aa5.65□□□□□ -1.5
SEC20YDR498C DUN1P39009 513 aa5.65□□□□□ -1.5
SEC20YDR498C DLD3P39976 496 aaKnown RBP5.65□□□□□ -1.5
SEC20YDR498C ECM10P39987 644 aa5.65□□□□□ -1.5
SEC20YDR498C MMF1P40185 145 aaKnown RBP5.65□□□□□ -1.5
SEC20YDR498C YIL001WP40560 513 aa5.65□□□□□ -1.5
SEC20YDR498C IAH1P41734 238 aa5.65□□□□□ -1.5
SEC20YDR498C FKH2P41813 862 aa5.65□□□□□ -1.5
SEC20YDR498C RMD8P43620 662 aa5.65□□□□□ -1.5
SEC20YDR498C FMP33P46998 180 aa5.65□□□□□ -1.5
SEC20YDR498C MNT2P53059 558 aa5.65□□□□□ -1.5
SEC20YDR498C MTO1P53070 669 aa5.65□□□□□ -1.5
SEC20YDR498C ARI1P53111 347 aaKnown RBP5.65□□□□□ -1.5
SEC20YDR498C GTR2P53290 341 aa5.65□□□□□ -1.5
SEC20YDR498C NOP19P53317 196 aaPredicted RBP5.65□□□□□ -1.5
SEC20YDR498C ARC35P53731 342 aaKnown RBP5.65□□□□□ -1.5
SEC20YDR498C ORC3P54790 616 aa5.65□□□□□ -1.5
SEC20YDR498C SDH1Q00711 640 aa5.65□□□□□ -1.5
SEC20YDR498C AAT1Q01802 451 aa5.65□□□□□ -1.5
SEC20YDR498C SPO71Q03868 1245 aa5.65□□□□□ -1.5
SEC20YDR498C HFD1Q04458 532 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms