RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	SGM1	P47166	707 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	YPL014W	Q02606	381 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	MUB1	Q03162	620 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	EMI2	Q04409	500 aa	Known RBP	2.62	□□□□□ -1.99
PPN1	YDR452W	RCO1	Q04779	684 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	SKG3	Q06315	1026 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	SSK1	Q07084	712 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	GRC3	Q07845	632 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	SET6	Q12529	373 aa		2.62	□□□□□ -1.99
PPN1	YDR452W	NDC1	P32500	655 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	CNS1	P33313	385 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	SAM50	P53969	484 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	ERP1	Q05359	219 aa	Known RBP	2.61	□□□□□ -1.99
PPN1	YDR452W	CDC45	Q08032	650 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
PPN1	YDR452W	PWP1	P21304	576 aa	Known RBP	2.61	□□□□□ -1.99
PPN1	YDR452W	ROT2	P38138	954 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	RRP3	P38712	501 aa	Known RBP	2.61	□□□□□ -1.99
PPN1	YDR452W	AXL2	P38928	823 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	VPS52	P39904	641 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	YJR008W	P47085	338 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	GTR1	Q00582	310 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	NKP1	Q12493	238 aa		2.61	□□□□□ -1.99
PPN1	YDR452W	HEM2	P05373	342 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	SYN8	P31377	255 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	SPC110	P32380	944 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	PDB1	P32473	366 aa	Known RBP	2.6	□□□□□ -1.99
PPN1	YDR452W	MTR2	P34232	184 aa	Known RBP	2.6	□□□□□ -1.99
PPN1	YDR452W	LAG1	P38703	411 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	DBP8	P38719	431 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	YTA12	P40341	825 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	TPM2	P40414	161 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	RSM23	Q01163	450 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	SNO4	Q04902	237 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	HSP33	Q08914	237 aa	Known RBP	2.6	□□□□□ -1.99
PPN1	YDR452W	HSP32	Q08992	237 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	AYT1	Q12226	474 aa		2.6	□□□□□ -1.99
PPN1	YDR452W	ARG81	P05085	880 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	SEC62	P21825	274 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	KTR3	P38130	404 aa	Predicted RBP	2.59	□□□□□ -1.99
PPN1	YDR452W	MTC4	P38335	694 aa	Known RBP	2.59	□□□□□ -1.99
PPN1	YDR452W	TIF5	P38431	405 aa	Known RBP	2.59	□□□□□ -1.99
PPN1	YDR452W	UME6	P39001	836 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	IES5	P40060	125 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	SAP185	P40856	1058 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	YPI1	P43587	155 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	ECM30	Q06673	1274 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	TEN1	Q07921	160 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	YOL087C	Q99247	1116 aa		2.59	□□□□□ -1.99
PPN1	YDR452W	MTF1	P14908	341 aa	Known RBP	2.59	□□□□□ -2
PPN1	YDR452W	SPE2	P21182	396 aa		2.59	□□□□□ -2
PPN1	YDR452W	YCR022C	P25620	114 aa		2.59	□□□□□ -2
PPN1	YDR452W	CMK1	P27466	446 aa	Known RBP	2.59	□□□□□ -2
PPN1	YDR452W	PTR2	P32901	601 aa		2.59	□□□□□ -2
PPN1	YDR452W	VPS17	P32913	551 aa		2.59	□□□□□ -2
PPN1	YDR452W	PSY4	P38193	441 aa		2.59	□□□□□ -2
PPN1	YDR452W	YNG2	P38806	282 aa	Known RBP	2.59	□□□□□ -2
PPN1	YDR452W	YER010C	P40011	234 aa		2.59	□□□□□ -2
PPN1	YDR452W	LYS4	P49367	693 aa	Predicted RBP	2.59	□□□□□ -2
PPN1	YDR452W	RHO4	Q00246	291 aa		2.59	□□□□□ -2
PPN1	YDR452W	YMR160W	Q03823	816 aa		2.59	□□□□□ -2
PPN1	YDR452W	SWH1	P35845	1188 aa		2.58	□□□□□ -2
PPN1	YDR452W	ERG26	P53199	349 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	SMM1	P53720	384 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	RLI1	Q03195	608 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	RIX7	Q07844	837 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	AMD1	P15274	810 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	TIF3	P34167	436 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	PTH2	P34222	208 aa		2.58	□□□□□ -2
PPN1	YDR452W	DIA3	P52290	468 aa		2.58	□□□□□ -2
PPN1	YDR452W	IOC4	Q04213	475 aa		2.58	□□□□□ -2
PPN1	YDR452W	PSR1	Q07800	427 aa		2.58	□□□□□ -2
PPN1	YDR452W	LEU9	Q12166	604 aa	Known RBP	2.58	□□□□□ -2
PPN1	YDR452W	KGD1	P20967	1014 aa	Known RBP	2.57	□□□□□ -2
PPN1	YDR452W	CBF2	P32504	956 aa		2.57	□□□□□ -2
PPN1	YDR452W	YEL068C	P39977	110 aa		2.57	□□□□□ -2
PPN1	YDR452W	AAD10	P47182	288 aa		2.57	□□□□□ -2
PPN1	YDR452W	DRN1	P53255	507 aa	Known RBP	2.57	□□□□□ -2
PPN1	YDR452W	BUD32	P53323	261 aa		2.57	□□□□□ -2
PPN1	YDR452W	MSC1	Q03104	513 aa		2.57	□□□□□ -2
PPN1	YDR452W	ENT4	Q07872	247 aa		2.56	□□□□□ -2
PPN1	YDR452W	SSM4	P40318	1319 aa		2.56	□□□□□ -2
PPN1	YDR452W	RPL20A	P0CX23	172 aa	Known RBP	2.56	□□□□□ -2
PPN1	YDR452W	RPL20B	P0CX24	172 aa	Predicted RBP	2.56	□□□□□ -2
PPN1	YDR452W	APE1	P14904	514 aa		2.56	□□□□□ -2
PPN1	YDR452W	OSH3	P38713	996 aa	Known RBP	2.56	□□□□□ -2
PPN1	YDR452W	YGL082W	P53155	381 aa		2.56	□□□□□ -2
PPN1	YDR452W	YCL021W-A	Q96VH3	125 aa		2.56	□□□□□ -2
PPN1	YDR452W	BUD5	P25300	642 aa	Predicted RBP	2.55	□□□□□ -2
PPN1	YDR452W	MRPL4	P36517	319 aa		2.55	□□□□□ -2
PPN1	YDR452W	CSM2	P40465	213 aa		2.55	□□□□□ -2
PPN1	YDR452W	IDP2	P41939	412 aa		2.55	□□□□□ -2
PPN1	YDR452W	SIP4	P46954	829 aa		2.55	□□□□□ -2
PPN1	YDR452W	YJL132W	P47014	750 aa		2.55	□□□□□ -2
PPN1	YDR452W	SHE10	P53075	577 aa		2.55	□□□□□ -2
PPN1	YDR452W	DPB4	Q04603	196 aa	Known RBP	2.55	□□□□□ -2
PPN1	YDR452W	NCE102	Q12207	173 aa	RIP-Chip data	2.55	□□□□□ -2	not detected
PPN1	YDR452W	ADH7	P25377	361 aa		2.54	□□□□□ -2
PPN1	YDR452W	LDB16	P25587	256 aa		2.54	□□□□□ -2
PPN1	YDR452W	SLC1	P33333	303 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms