RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	MSO1	P53604	210 aa	Known RBP	3.21	□□□□□ -1.9
SHE9	YDR393W	YPL014W	Q02606	381 aa		3.21	□□□□□ -1.9
SHE9	YDR393W	MHR1	Q06630	226 aa		3.21	□□□□□ -1.9
SHE9	YDR393W	HNT3	Q08702	217 aa		3.21	□□□□□ -1.9
SHE9	YDR393W	TMA7	Q3E764	64 aa	Known RBP	3.21	□□□□□ -1.9
SHE9	YDR393W	PUT2	P07275	575 aa		3.2	□□□□□ -1.9
SHE9	YDR393W	YCR022C	P25620	114 aa		3.2	□□□□□ -1.9
SHE9	YDR393W	YMR160W	Q03823	816 aa		3.2	□□□□□ -1.9
SHE9	YDR393W	RPS10A	Q08745	105 aa	Predicted RBP	3.2	□□□□□ -1.9
SHE9	YDR393W	ERG27	Q12452	347 aa	Known RBP	3.2	□□□□□ -1.9
SHE9	YDR393W	ATR1	P13090	542 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	YCL049C	P25577	312 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	SPR1	P32603	445 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	MRPL36	P36531	177 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	UIP3	P39547	235 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	NPR2	P39923	615 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	PSF2	P40359	213 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	CSM2	P40465	213 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	TIS11	P47977	285 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	RHO4	Q00246	291 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	RLI1	Q03195	608 aa	Known RBP	3.19	□□□□□ -1.9
SHE9	YDR393W	YOR387C	Q08910	206 aa		3.19	□□□□□ -1.9
SHE9	YDR393W	RRP12	Q12754	1228 aa	Known RBP	3.19	□□□□□ -1.9
SHE9	YDR393W	AMD1	P15274	810 aa	Known RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	SGV1	P23293	657 aa	Known RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	SEC24	P40482	926 aa	Known RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	IST3	P40565	148 aa	Predicted RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	YGL039W	P53183	348 aa	Known RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	BTN2	P53286	410 aa		3.18	□□□□□ -1.9
SHE9	YDR393W	INN1	P53901	409 aa		3.18	□□□□□ -1.9
SHE9	YDR393W	REG1	Q00816	1014 aa		3.18	□□□□□ -1.9
SHE9	YDR393W	EMI2	Q04409	500 aa	Known RBP	3.18	□□□□□ -1.9
SHE9	YDR393W	SPE2	P21182	396 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	NAM9	P27929	486 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	YIM1	P28625	365 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	MSN2	P33748	704 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	ARC35	P53731	342 aa	Known RBP	3.17	□□□□□ -1.9
SHE9	YDR393W	ENT4	Q07872	247 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	PSK2	Q08217	1101 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	NKP1	Q12493	238 aa		3.17	□□□□□ -1.9
SHE9	YDR393W	ARG81	P05085	880 aa		3.16	□□□□□ -1.9
SHE9	YDR393W	NAT1	P12945	854 aa	Known RBP	3.16	□□□□□ -1.9
SHE9	YDR393W	SPT15	P13393	240 aa	Known RBP	3.16	□□□□□ -1.9
SHE9	YDR393W	ERG8	P24521	451 aa		3.16	□□□□□ -1.9
SHE9	YDR393W	PTP2	P29461	750 aa		3.16	□□□□□ -1.9
SHE9	YDR393W	TSC10	P38342	320 aa		3.16	□□□□□ -1.9
SHE9	YDR393W	PSD1	P39006	500 aa		3.16	□□□□□ -1.9
SHE9	YDR393W	CAR1	P00812	333 aa	Known RBP	3.15	□□□□□ -1.9
SHE9	YDR393W	APE1	P14904	514 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	ISY1	P21374	235 aa	Predicted RBP	3.15	□□□□□ -1.9
SHE9	YDR393W	RNA14	P25298	677 aa	Known RBP	3.15	□□□□□ -1.9
SHE9	YDR393W	FUN19	P28003	413 aa	Predicted RBP	3.15	□□□□□ -1.9
SHE9	YDR393W	YME1	P32795	747 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	OSH3	P38713	996 aa	Known RBP	3.15	□□□□□ -1.9
SHE9	YDR393W	DBP8	P38719	431 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	IME4	P41833	600 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	SGM1	P47166	707 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	GLO2	Q05584	274 aa		3.15	□□□□□ -1.9
SHE9	YDR393W	PUT3	P25502	979 aa	Predicted RBP	3.14	□□□□□ -1.91
SHE9	YDR393W	IFA38	P38286	347 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	DIA4	P38705	446 aa	Predicted RBP	3.14	□□□□□ -1.91
SHE9	YDR393W	YHL041W	P38730	149 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	SHO1	P40073	367 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	SMM1	P53720	384 aa	Known RBP	3.14	□□□□□ -1.91
SHE9	YDR393W	YLR152C	P54072	576 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	TFC6	Q06339	672 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	SYO1	Q07395	620 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	YDL009C	Q12210	107 aa		3.14	□□□□□ -1.91
SHE9	YDR393W	PRS1	P32895	427 aa	Known RBP	3.13	□□□□□ -1.91
SHE9	YDR393W	ALG8	P40351	577 aa		3.13	□□□□□ -1.91
SHE9	YDR393W	CIA1	Q05583	330 aa		3.13	□□□□□ -1.91
SHE9	YDR393W	RTT109	Q07794	436 aa		3.13	□□□□□ -1.91
SHE9	YDR393W	YBR085C-A	O43137	85 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	DEG1	P31115	442 aa	Known RBP	3.12	□□□□□ -1.91
SHE9	YDR393W	YGR210C	P42942	411 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	ERG26	P53199	349 aa	Known RBP	3.12	□□□□□ -1.91
SHE9	YDR393W	RSM23	Q01163	450 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	TMS1	Q12116	473 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	MTF2	P10849	440 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	UBC1	P21734	215 aa	Known RBP	3.12	□□□□□ -1.91
SHE9	YDR393W	SWD3	P38123	315 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	ELO1	P39540	310 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	VPS4	P52917	437 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	INA17	Q02888	182 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	BNA5	Q05979	453 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	ECM30	Q06673	1274 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	CTF3	Q12748	733 aa		3.12	□□□□□ -1.91
SHE9	YDR393W	NUC1	P08466	329 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	RAD16	P31244	790 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	CBF2	P32504	956 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	YBL059W	P34224	193 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	MTR2	P34232	184 aa	Known RBP	3.11	□□□□□ -1.91
SHE9	YDR393W	NDT80	P38830	627 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	ERV2	Q12284	196 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	HRT3	Q12347	344 aa		3.11	□□□□□ -1.91
SHE9	YDR393W	HAT2	P39984	401 aa		3.1	□□□□□ -1.91
SHE9	YDR393W	BUR6	P40096	142 aa		3.1	□□□□□ -1.91
SHE9	YDR393W	MRPL13	Q02204	264 aa		3.1	□□□□□ -1.91
SHE9	YDR393W	ELP3	Q02908	557 aa	Known RBP	3.1	□□□□□ -1.91
SHE9	YDR393W	RRG7	Q08774	242 aa	Predicted RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms