RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C TIM10P87108 93 aa5.05□□□□□ -1.6
LSM6YDR378C RSM23Q01163 450 aa5.05□□□□□ -1.6
LSM6YDR378C VPS38Q05919 439 aa5.05□□□□□ -1.6
LSM6YDR378C CDC45Q08032 650 aa5.05□□□□□ -1.6
LSM6YDR378C BUD7Q08754 746 aa5.05□□□□□ -1.6
LSM6YDR378C CDC31P06704 161 aaKnown RBP5.04□□□□□ -1.6
LSM6YDR378C SNF3P10870 884 aa5.04□□□□□ -1.6
LSM6YDR378C YCP4P25349 247 aaKnown RBP5.04□□□□□ -1.6
LSM6YDR378C YBL055CP34220 418 aaPredicted RBP5.04□□□□□ -1.6
LSM6YDR378C YKL100CP34248 587 aa5.04□□□□□ -1.6
LSM6YDR378C LEU5P38702 357 aa5.04□□□□□ -1.6
LSM6YDR378C CCT6P39079 546 aa5.04□□□□□ -1.6
LSM6YDR378C NOC2P39744 710 aaKnown RBP5.04□□□□□ -1.6
LSM6YDR378C MAF1P41910 395 aa5.04□□□□□ -1.6
LSM6YDR378C SRB7P47822 140 aa5.04□□□□□ -1.6
LSM6YDR378C MRPL19P53875 158 aa5.04□□□□□ -1.6
LSM6YDR378C IPI3P53877 555 aa5.04□□□□□ -1.6
LSM6YDR378C YNL181WP53878 407 aa5.04□□□□□ -1.6
LSM6YDR378C ADE13Q05911 482 aaKnown RBP5.04□□□□□ -1.6
LSM6YDR378C RDR1Q08904 546 aa5.04□□□□□ -1.6
LSM6YDR378C RGT2Q12300 763 aa5.04□□□□□ -1.6
LSM6YDR378C ARG3P05150 338 aa5.03□□□□□ -1.6
LSM6YDR378C PUT2P07275 575 aa5.03□□□□□ -1.6
LSM6YDR378C DFR1P07807 211 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
LSM6YDR378C RPL42AP0CX27 106 aaKnown RBP5.03□□□□□ -1.6
LSM6YDR378C RPL42BP0CX28 106 aaKnown RBP5.03□□□□□ -1.6
LSM6YDR378C BUD5P25300 642 aaPredicted RBP5.03□□□□□ -1.6
LSM6YDR378C SYN8P31377 255 aa5.03□□□□□ -1.6
LSM6YDR378C RPL32P38061 130 aaKnown RBP5.03□□□□□ -1.6
LSM6YDR378C ROT2P38138 954 aa5.03□□□□□ -1.6
LSM6YDR378C GND1P38720 489 aaKnown RBP5.03□□□□□ -1.6
LSM6YDR378C UBA4P38820 440 aa5.03□□□□□ -1.6
LSM6YDR378C RTT109Q07794 436 aa5.03□□□□□ -1.6
LSM6YDR378C RPS10AQ08745 105 aaPredicted RBP5.03□□□□□ -1.6
LSM6YDR378C AVL9Q12500 764 aa5.03□□□□□ -1.6
LSM6YDR378C FOB1O13329 566 aa5.02□□□□□ -1.61
LSM6YDR378C PDA1P16387 420 aaKnown RBP5.02□□□□□ -1.61
LSM6YDR378C ART10P18634 518 aaKnown RBP5.02□□□□□ -1.61
LSM6YDR378C NUP133P36161 1157 aa5.02□□□□□ -1.61
LSM6YDR378C YPK3P38070 525 aa5.02□□□□□ -1.61
LSM6YDR378C SRO77P38163 1010 aa5.02□□□□□ -1.61
LSM6YDR378C ARP1P38696 384 aa5.02□□□□□ -1.61
LSM6YDR378C UTP9P38882 575 aaKnown RBP5.02□□□□□ -1.61
LSM6YDR378C PCL6P40038 420 aa5.02□□□□□ -1.61
LSM6YDR378C SPO22P40511 975 aa5.02□□□□□ -1.61
LSM6YDR378C DOT5P40553 215 aa5.02□□□□□ -1.61
LSM6YDR378C GAT1P43574 510 aa5.02□□□□□ -1.61
LSM6YDR378C IRC6P43615 237 aa5.02□□□□□ -1.61
LSM6YDR378C RPS10BP46784 105 aaKnown RBP5.02□□□□□ -1.61
LSM6YDR378C APT1P49435 187 aaKnown RBP5.02□□□□□ -1.61
LSM6YDR378C GEP3Q08622 556 aa5.02□□□□□ -1.61
LSM6YDR378C SGS1P35187 1447 aa5.01□□□□□ -1.61
LSM6YDR378C GAL80P04387 435 aa5.01□□□□□ -1.61
LSM6YDR378C MRP13P12686 339 aa5.01□□□□□ -1.61
LSM6YDR378C PDR3P33200 976 aa5.01□□□□□ -1.61
LSM6YDR378C TIF3P34167 436 aaKnown RBP5.01□□□□□ -1.61
LSM6YDR378C CIN4P39110 191 aa5.01□□□□□ -1.61
LSM6YDR378C PHO90P39535 881 aa5.01□□□□□ -1.61
LSM6YDR378C SGN1P40561 250 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
LSM6YDR378C IAH1P41734 238 aa5.01□□□□□ -1.61
LSM6YDR378C IMD4P50094 524 aaKnown RBP5.01□□□□□ -1.61
LSM6YDR378C HOS2P53096 452 aaPredicted RBP5.01□□□□□ -1.61
LSM6YDR378C SEC5P89102 971 aa5.01□□□□□ -1.61
LSM6YDR378C EKI1Q03764 534 aa5.01□□□□□ -1.61
LSM6YDR378C SUI2P20459 304 aaKnown RBP5□□□□□ -1.61
LSM6YDR378C MTR2P34232 184 aaKnown RBP5□□□□□ -1.61
LSM6YDR378C TCD2P36101 447 aaKnown RBP5□□□□□ -1.61
LSM6YDR378C SOL4P53315 255 aa5□□□□□ -1.61
LSM6YDR378C DUG3P53871 357 aa5□□□□□ -1.61
LSM6YDR378C ESBP6P53918 673 aa5□□□□□ -1.61
LSM6YDR378C DSE3Q08729 430 aa5□□□□□ -1.61
LSM6YDR378C YPT1P01123 206 aaKnown RBP4.99□□□□□ -1.61
LSM6YDR378C CKA1P15790 372 aa4.99□□□□□ -1.61
LSM6YDR378C GID7P25569 745 aa4.99□□□□□ -1.61
LSM6YDR378C MET28P40573 187 aa4.99□□□□□ -1.61
LSM6YDR378C PYK2P52489 506 aaKnown RBP4.99□□□□□ -1.61
LSM6YDR378C PKP2P53170 491 aa4.99□□□□□ -1.61
LSM6YDR378C YGR126WP53274 230 aa4.99□□□□□ -1.61
LSM6YDR378C YVH1Q02256 364 aaKnown RBP4.99□□□□□ -1.61
LSM6YDR378C YDR239CQ03780 787 aa4.99□□□□□ -1.61
LSM6YDR378C YMR160WQ03823 816 aa4.99□□□□□ -1.61
LSM6YDR378C FIN1Q03898 291 aa4.99□□□□□ -1.61
LSM6YDR378C MET17P06106 444 aa4.98□□□□□ -1.61
LSM6YDR378C SNC1P31109 117 aa4.98□□□□□ -1.61
LSM6YDR378C ATO2P32907 282 aa4.98□□□□□ -1.61
LSM6YDR378C LAG1P38703 411 aa4.98□□□□□ -1.61
LSM6YDR378C YEL057CP39983 233 aa4.98□□□□□ -1.61
LSM6YDR378C RTS2P40962 232 aa4.98□□□□□ -1.61
LSM6YDR378C SMM1P53720 384 aaKnown RBP4.98□□□□□ -1.61
LSM6YDR378C NUP100Q02629 959 aa4.98□□□□□ -1.61
LSM6YDR378C YLR287CQ05881 355 aa4.98□□□□□ -1.61
LSM6YDR378C SSK1Q07084 712 aa4.98□□□□□ -1.61
LSM6YDR378C SNA4Q07549 140 aa4.98□□□□□ -1.61
LSM6YDR378C MLH2Q07980 695 aa4.98□□□□□ -1.61
LSM6YDR378C RLM1Q12224 676 aa4.98□□□□□ -1.61
LSM6YDR378C ICT1Q12385 394 aa4.98□□□□□ -1.61
LSM6YDR378C HSH49Q99181 213 aaPredicted RBP4.98□□□□□ -1.61
LSM6YDR378C YME1P32795 747 aa4.97□□□□□ -1.61
LSM6YDR378C YKL023WP36103 277 aaKnown RBP4.97□□□□□ -1.61
LSM6YDR378C MSR1P38714 643 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms