RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W GTB1Q04924 702 aa1.38□□□□□ -2.19
MSN5YDR335W DIA2Q08496 732 aaPredicted RBP1.38□□□□□ -2.19
MSN5YDR335W RIM15P43565 1770 aa1.38□□□□□ -2.19
MSN5YDR335W FBP1P09201 348 aa1.38□□□□□ -2.19
MSN5YDR335W SPS22P25380 463 aa1.38□□□□□ -2.19
MSN5YDR335W CUE2P36075 443 aaKnown RBP1.38□□□□□ -2.19
MSN5YDR335W ADH5P38113 351 aaKnown RBP1.38□□□□□ -2.19
MSN5YDR335W MMS4P38257 691 aa1.38□□□□□ -2.19
MSN5YDR335W MMS21P38632 267 aa1.38□□□□□ -2.19
MSN5YDR335W BFR1P38934 470 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
MSN5YDR335W IME4P41833 600 aa1.38□□□□□ -2.19
MSN5YDR335W UBX6P47049 396 aa1.38□□□□□ -2.19
MSN5YDR335W PNC1P53184 216 aaKnown RBP1.38□□□□□ -2.19
MSN5YDR335W VPS9P54787 451 aa1.38□□□□□ -2.19
MSN5YDR335W HOT1Q03213 719 aa1.38□□□□□ -2.19
MSN5YDR335W YLR297WQ05899 129 aa1.38□□□□□ -2.19
MSN5YDR335W RRT8Q08219 342 aa1.38□□□□□ -2.19
MSN5YDR335W LAS17Q12446 633 aa1.38□□□□□ -2.19
MSN5YDR335W RRP36Q12481 300 aaPredicted RBP1.38□□□□□ -2.19
MSN5YDR335W TFB5Q3E7C1 72 aaPredicted RBP1.38□□□□□ -2.19
MSN5YDR335W VPS63O13549 108 aa1.37□□□□□ -2.19
MSN5YDR335W YPR089WO13585 888 aa1.37□□□□□ -2.19
MSN5YDR335W TDH1P00360 332 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W CDC36P06100 191 aaPredicted RBP1.37□□□□□ -2.19
MSN5YDR335W YMR085WP0CF18 432 aa1.37□□□□□ -2.19
MSN5YDR335W CDC15P27636 974 aa1.37□□□□□ -2.19
MSN5YDR335W CBF5P33322 483 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
MSN5YDR335W UBP13P38187 747 aa1.37□□□□□ -2.19
MSN5YDR335W ICS2P38284 255 aa1.37□□□□□ -2.19
MSN5YDR335W SLX1P38324 304 aa1.37□□□□□ -2.19
MSN5YDR335W KSP1P38691 1029 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W DED81P38707 554 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W SPT8P38915 602 aa1.37□□□□□ -2.19
MSN5YDR335W BEM4P39011 633 aa1.37□□□□□ -2.19
MSN5YDR335W GIP4P39732 760 aa1.37□□□□□ -2.19
MSN5YDR335W HXT14P42833 540 aa1.37□□□□□ -2.19
MSN5YDR335W ARC1P46672 376 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W ALT2P52892 507 aa1.37□□□□□ -2.19
MSN5YDR335W DCP2P53550 970 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W PDR16P53860 351 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W UBP16Q02863 499 aa1.37□□□□□ -2.19
MSN5YDR335W CLU1Q03690 1277 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W ARG7Q04728 441 aa1.37□□□□□ -2.19
MSN5YDR335W YML053CQ04978 212 aa1.37□□□□□ -2.19
MSN5YDR335W ARR1Q06596 294 aa1.37□□□□□ -2.19
MSN5YDR335W DIS3Q08162 1001 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W SUL2Q12325 893 aa1.37□□□□□ -2.19
MSN5YDR335W LDB17Q12342 491 aa1.37□□□□□ -2.19
MSN5YDR335W YJR112W-AQ3E743 109 aa1.37□□□□□ -2.19
MSN5YDR335W APM4Q99186 491 aa1.37□□□□□ -2.19
MSN5YDR335W ERG11P10614 530 aa1.37□□□□□ -2.19
MSN5YDR335W CPR2P23285 205 aa1.37□□□□□ -2.19
MSN5YDR335W RIM1P32445 135 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W HIS7P33734 552 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W ATG19P35193 415 aa1.37□□□□□ -2.19
MSN5YDR335W CAB3P36076 571 aa1.37□□□□□ -2.19
MSN5YDR335W NTC20P38302 140 aaPredicted RBP1.37□□□□□ -2.19
MSN5YDR335W YHR045WP38775 560 aa1.37□□□□□ -2.19
MSN5YDR335W SEC31P38968 1273 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W MSS4P38994 779 aa1.37□□□□□ -2.19
MSN5YDR335W YMR124WP39523 943 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W YHB1P39676 399 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W PFA3P42836 336 aa1.37□□□□□ -2.19
MSN5YDR335W BUD27P43573 796 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
MSN5YDR335W ASE1P50275 885 aa1.37□□□□□ -2.19
MSN5YDR335W MCM6P53091 1017 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W YGL036WP53185 909 aaPredicted RBP1.37□□□□□ -2.19
MSN5YDR335W YGR012WP53206 393 aa1.37□□□□□ -2.19
MSN5YDR335W SNF12P53628 566 aa1.37□□□□□ -2.19
MSN5YDR335W MRPL22P53881 309 aa1.37□□□□□ -2.19
MSN5YDR335W SLU7Q02775 382 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W MFM1Q02783 413 aa1.37□□□□□ -2.19
MSN5YDR335W TRS31Q03337 283 aa1.37□□□□□ -2.19
MSN5YDR335W WAR1Q03631 944 aa1.37□□□□□ -2.19
MSN5YDR335W TMA10Q06177 86 aa1.37□□□□□ -2.19
MSN5YDR335W UBX3Q12229 455 aa1.37□□□□□ -2.19
MSN5YDR335W YOR012WQ12351 137 aa1.37□□□□□ -2.19
MSN5YDR335W GRX6Q12438 231 aa1.37□□□□□ -2.19
MSN5YDR335W ARD1P07347 238 aaPredicted RBP1.37□□□□□ -2.19
MSN5YDR335W RPL1AP0CX43 217 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W RPL1BP0CX44 217 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W DAP2P18962 818 aa1.37□□□□□ -2.19
MSN5YDR335W SGV1P23293 657 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W VPS3P23643 1011 aa1.37□□□□□ -2.19
MSN5YDR335W SPB1P25582 841 aaPredicted RBP1.37□□□□□ -2.19
MSN5YDR335W SMY1P32364 656 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W PUP2P32379 260 aa1.37□□□□□ -2.19
MSN5YDR335W GSH1P32477 678 aa1.37□□□□□ -2.19
MSN5YDR335W KRE6P32486 720 aa1.37□□□□□ -2.19
MSN5YDR335W CBF2P32504 956 aa1.37□□□□□ -2.19
MSN5YDR335W SPR1P32603 445 aa1.37□□□□□ -2.19
MSN5YDR335W TSA1P34760 196 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W HEL1P36113 551 aa1.37□□□□□ -2.19
MSN5YDR335W CCL1P37366 393 aa1.37□□□□□ -2.19
MSN5YDR335W KAP104P38217 918 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W TDP1P38319 544 aa1.37□□□□□ -2.19
MSN5YDR335W UBP5P39944 805 aa1.37□□□□□ -2.19
MSN5YDR335W MRX1P40050 688 aa1.37□□□□□ -2.19
MSN5YDR335W RGI2P40188 164 aa1.37□□□□□ -2.19
MSN5YDR335W MET18P40469 1032 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms