RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 DYNLL2Q96FJ2 89 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 SLC9A7Q96T83 725 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 AP5M1Q9H0R1 490 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 UBE2ZQ9H832 354 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-217ENST00000641455 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 GPR108Q9NPR9 543 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 SWAP70Q9UH65 585 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 ADAMTS5Q9UNA0 930 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 ZNF536O15090 1300 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 XIRP2A4UGR9 3374 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 CTAGE5O15320 804 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 ARHGEF15O94989 841 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 GNAI2P04899 355 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 CYP2C9P11712 490 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 KCNA5P22460 613 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 PSMC6P62333 389 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 TLK2Q86UE8 772 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 SIAH1Q8IUQ4 282 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 FAM178BQ8IXR5 827 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 ANKRD35Q8N283 1001 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 SLC43A3Q8NBI5 491 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 REPS2Q8NFH8 660 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 SDR42E1Q8WUS8 393 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 SLF1Q9BQI6 1058 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 RIOK1Q9BRS2 568 aaKnown RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 CCDC8Q9H0W5 538 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-217ENST00000641455 RIPK3Q9Y572 518 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 SCN5AQ14524 2016 aa9.48□□□□□ -0.89
PHGDH-217ENST00000641455 DNAJC25-GNG10A0A024R161 153 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-217ENST00000641455 DYNC1LI2O43237 492 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-217ENST00000641455 DCXO43602 365 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 IL9P15248 144 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 KCNJ6P48051 423 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 SPRED2Q7Z698 418 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 HERC6Q8IVU3 1022 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 CCDC144CPQ8IYA2 1237 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 CCDC17Q96LX7 622 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 NUP88Q99567 741 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-217ENST00000641455 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 KCNH6Q9H252 994 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
PHGDH-217ENST00000641455 DBNLQ9UJU6 430 aaKnown RBP9.47□□□□□ -0.89
PHGDH-217ENST00000641455 MTUS1Q9ULD2 1270 aa9.47□□□□□ -0.89
PHGDH-217ENST00000641455 LPXNO60711 386 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 ZBED4O75132 1171 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 SURF6O75683 361 aaKnown RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 SUPT20HL2P0C7V6 817 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 PHOSPHO2Q8TCD6 241 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 RAVER2Q9HCJ3 691 aaKnown RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 TRMT13Q9NUP7 481 aaKnown RBP9.46□□□□□ -0.9
PHGDH-217ENST00000641455 ASTN1O14525 1302 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
PHGDH-217ENST00000641455 ANP32CO43423 234 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 PTGS1P23219 599 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 NKX3-2P78367 333 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 FAM47CQ5HY64 1035 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-217ENST00000641455 EP400NLQ6ZTU2 488 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 LCORLQ8N3X6 602 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-217ENST00000641455 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 VWCEQ96DN2 955 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 FGD4Q96M96 766 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 LMCD1Q9NZU5 365 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 FBXO40Q9UH90 709 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 ISY1Q9ULR0 285 aaKnown RBP9.45□□□□□ -0.9
PHGDH-217ENST00000641455 TNKSO95271 1327 aa9.45□□□□□ -0.9
PHGDH-217ENST00000641455 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
PHGDH-217ENST00000641455 TRANK1O15050 2925 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 LCHNA4D1U4 455 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 PDE6AP16499 860 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 RFC2P35250 354 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 CDK8P49336 464 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 CNTN2Q02246 1040 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 SLC9C2Q5TAH2 1124 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 EEPD1Q7L9B9 569 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 KATNBL1Q9H079 304 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 ARMT1Q9H993 441 aa9.44□□□□□ -0.9
PHGDH-217ENST00000641455 GNEQ9Y223 722 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms