RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
PHGDH-216ENST00000641375 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 LAD1O00515 517 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 NDUFB10O96000 172 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 PRELPP51888 382 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 INF2Q27J81 1249 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 COA7Q96BR5 231 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 CCDC34Q96HJ3 373 aa18.72■□□□□ 0.59
PHGDH-216ENST00000641375 RASA3Q14644 834 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 LONRF3Q496Y0 759 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 NAT10Q9H0A0 1025 aaKnown RBP18.71■□□□□ 0.59
PHGDH-216ENST00000641375 GLT8D2Q9H1C3 349 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 CBX8Q9HC52 389 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
PHGDH-216ENST00000641375 BMP3P12645 472 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 CAP2P40123 477 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 ORC2Q13416 577 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-216ENST00000641375 MIGA2Q7L4E1 593 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 RIC8AQ9NPQ8 531 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
PHGDH-216ENST00000641375 NEK8Q86SG6 692 aa18.7■□□□□ 0.58
PHGDH-216ENST00000641375 SH2D4AQ9H788 454 aa18.7■□□□□ 0.58
PHGDH-216ENST00000641375 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 ASNSP08243 561 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 CEP57L1Q8IYX8 460 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 CUL5Q93034 780 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 PYM1Q9BRP8 204 aaKnown RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 BIN2Q9UBW5 565 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 USP25Q9UHP3 1055 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 PPP1R11O60927 126 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 EGFRP00533 1210 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 CDC37Q16543 378 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 LUZP1Q86V48 1076 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 SYMPKQ92797 1274 aaKnown RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 ERCC4Q92889 916 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-216ENST00000641375 TUBE1Q9UJT0 475 aa18.69■□□□□ 0.58
PHGDH-216ENST00000641375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-216ENST00000641375 H7C1D1 291 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 LMNB1P20700 586 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 PRPHP41219 470 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 QRICH1Q2TAL8 776 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 KIF4BQ2VIQ3 1234 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 ATAD5Q96QE3 1844 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 ZNF541Q9H0D2 1346 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 TMEM232C9JQI7 657 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-216ENST00000641375 SYDE2Q5VT97 1194 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 JAKMIP3Q5VZ66 844 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 ARHGAP27Q6ZUM4 889 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 USP49Q70CQ1 688 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
PHGDH-216ENST00000641375 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
PHGDH-216ENST00000641375 ECE1P42892 770 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 NLRP12P59046 1061 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 LETM2Q2VYF4 491 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-216ENST00000641375 DTHD1Q6ZMT9 781 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 GINM1Q9NU53 330 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 HACL1Q9UJ83 578 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 PCDHA1Q9Y5I3 950 aa18.67■□□□□ 0.58
PHGDH-216ENST00000641375 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-216ENST00000641375 PNOCQ13519 176 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 POSTNQ15063 836 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 C11orf57Q6ZUT1 292 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-216ENST00000641375 PDILTQ8N807 584 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-216ENST00000641375 AMNQ9BXJ7 453 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 SERTAD1Q9UHV2 236 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 GOLGA6L19H0YKK7 550 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
PHGDH-216ENST00000641375 TXLNAP40222 546 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
PHGDH-216ENST00000641375 STAT2P52630 851 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 GPC2Q8N158 579 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 ACER1Q8TDN7 264 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 SBF1O95248 1867 aa18.66■□□□□ 0.58
PHGDH-216ENST00000641375 NEMFO60524 1076 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 ADCY5O95622 1261 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 TRAF1Q13077 416 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 IQCB1Q15051 598 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 IL17AQ16552 155 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 HS1BP3Q53T59 392 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 BPIFA3Q9BQP9 254 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 FHDC1Q9C0D6 1143 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-216ENST00000641375 VCPKMTQ9H867 229 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 PHF20L1A8MW92 1017 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 BECN2A8MW95 431 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms