RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 PLCD1P51178 756 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 GJA9P57773 515 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 GABPAQ06546 454 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 CAMK2BQ13554 666 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 TTLL4Q14679 1199 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 MAMDC4Q6UXC1 1216 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.94□□□□□ -0.82
SCARB2-226ENST00000640916 UIMC1Q96RL1 719 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 MMP19Q99542 508 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 NOL10Q9BSC4 688 aaKnown RBP9.94□□□□□ -0.82
SCARB2-226ENST00000640916 NOC4LQ9BVI4 516 aaKnown RBP9.94□□□□□ -0.82
SCARB2-226ENST00000640916 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 FAM184BQ9ULE4 1060 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 AKAP2Q9Y2D5 859 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 DCHS1Q96JQ0 3298 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 C5orf42Q9H799 3197 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 DNAJC25-GNG10A0A024R161 153 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 SLC25A27O95847 323 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 CYP2E1P05181 493 aaPredicted RBP9.93□□□□□ -0.82
SCARB2-226ENST00000640916 C6orf222P0C671 652 aaPredicted RBP9.93□□□□□ -0.82
SCARB2-226ENST00000640916 TMEM67Q5HYA8 995 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 ATF7IPQ6VMQ6 1270 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 RIOX2Q8IUF8 465 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 PCSK9Q8NBP7 692 aaKnown RBP9.93□□□□□ -0.82
SCARB2-226ENST00000640916 REPS2Q8NFH8 660 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 ARNTL2Q8WYA1 636 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 SCLYQ96I15 445 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 FGD4Q96M96 766 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 NEUROD6Q96NK8 337 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
SCARB2-226ENST00000640916 NAV1Q8NEY1 1877 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 ASTN1O14525 1302 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 TLR3O15455 904 aaKnown RBP9.92□□□□□ -0.82
SCARB2-226ENST00000640916 B4GALT4O60513 344 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 FLOT1O75955 427 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 UBTFL1P0CB47 393 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-226ENST00000640916 IL9P15248 144 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 DSG2Q14126 1118 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 LEXMQ3ZCV2 418 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 SSH1Q8WYL5 1049 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 KATNBL1Q9H079 304 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 TRPV6Q9H1D0 765 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 CABP5Q9NP86 173 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 PIH1D3Q9NQM4 214 aaKnown RBP9.92□□□□□ -0.82
SCARB2-226ENST00000640916 ZNF214Q9UL59 606 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-226ENST00000640916 CNPY2Q9Y2B0 182 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 MYH8P13535 1937 aa9.92□□□□□ -0.82
SCARB2-226ENST00000640916 ZBBXA8MT70 800 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 ALADP13716 330 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 BEX3Q00994 111 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 ACVR2BQ13705 512 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 CCDC144BQ3MJ40 725 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 CLEC10AQ8IUN9 316 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 RPUSD2Q8IZ73 545 aaKnown RBP9.91□□□□□ -0.82
SCARB2-226ENST00000640916 SPICE1Q8N0Z3 855 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 MSL3Q8N5Y2 521 aaKnown RBP9.91□□□□□ -0.82
SCARB2-226ENST00000640916 UBE2ZQ9H832 354 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-226ENST00000640916 FBXO28Q9NVF7 368 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 ZHX1Q9UKY1 873 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-226ENST00000640916 TECTAO75443 2155 aa9.91□□□□□ -0.82
SCARB2-226ENST00000640916 ST18O60284 1047 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 UQCRFS1P1P0C7P4 283 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 PTGS1P23219 599 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 STAT3P40763 770 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 ITGA7Q13683 1181 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 KCTD2Q14681 263 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 CXCL17Q6UXB2 119 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 MIGA1Q8NAN2 632 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 PRSS33Q8NF86 280 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 RIPK3Q9Y572 518 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 SIP14410 1827 aa9.9□□□□□ -0.82
SCARB2-226ENST00000640916 TANC1Q9C0D5 1861 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-226ENST00000640916 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 VWA5AO00534 786 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 DCXO43602 365 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 CYP7A1P22680 504 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 CSPP1Q1MSJ5 1256 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 GORABQ5T7V8 394 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 TTC6Q86TZ1 520 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 MEIS3Q99687 375 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
SCARB2-226ENST00000640916 VCPKMTQ9H867 229 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 ALG13Q9NP73 1137 aaKnown RBP9.89□□□□□ -0.83
SCARB2-226ENST00000640916 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-226ENST00000640916 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 TMX2Q9Y320 296 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
SCARB2-226ENST00000640916 TRIP12Q14669 1992 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-226ENST00000640916 ZDBF2Q9HCK1 2354 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 PLXNA3P51805 1871 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 LCHNA4D1U4 455 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 WDR46O15213 610 aaKnown RBP9.88□□□□□ -0.83
SCARB2-226ENST00000640916 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms