RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ANKRD20A3Q5VUR7 823 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 CALML4Q96GE6 196 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 RAB34Q9BZG1 259 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 AATFQ9NY61 560 aaKnown RBP eCLIP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF652Q9Y2D9 606 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 CYTH3O43739 400 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 MSL3P1P0C860 447 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 ADCK5Q3MIX3 580 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 ANO1Q5XXA6 986 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 CATSPER1Q8NEC5 780 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 KDM5AP29375 1690 aaKnown RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 RPS6KA3P51812 740 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 MYL10Q9BUA6 226 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF287Q9HBT7 754 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 PARP1P09874 1014 aaKnown RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 PLA2G4AP47712 749 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 PDE1CQ14123 709 aaPredicted RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 LRIG3Q6UXM1 1119 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 KRI1Q8N9T8 703 aaKnown RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM63Q969Q1 353 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 EPSTI1Q96J88 318 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 RIOK1Q9BRS2 568 aaKnown RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM55Q9BYV6 548 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF202O95125 648 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 KCNA6P17658 529 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 KRT2P35908 639 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 EAF2Q96CJ1 260 aaPredicted RBP9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ZBTB10Q96DT7 871 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 NRBF2Q96F24 287 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 CSRNP2Q9H175 543 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 CABP5Q9NP86 173 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 STRNO43815 780 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SCP2P22307 547 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 PDE4BQ07343 736 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ADALQ6DHV7 355 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
NECAP1-227ENST00000640648 PHKBQ93100 1093 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 FAM89AQ96GI7 184 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SLC40A1Q9NP59 571 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 BASP1P80723 227 aaKnown RBP9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ARID5AQ03989 594 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 UBXN1Q04323 297 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 TERB1Q8NA31 727 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 IL17REQ8NFR9 667 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 IP6K1Q92551 441 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SH3GL1Q99961 368 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 MMRN2Q9H8L6 949 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 HOMER2Q9NSB8 354 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SEPT3Q9UH03 358 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 NRBP1Q9UHY1 535 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 MAPK8IP1Q9UQF2 711 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 TARBP1Q13395 1621 aaKnown RBP9.05□□□□□ -0.96
NECAP1-227ENST00000640648 BCORL1Q5H9F3 1711 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 A0A087WWV3 80 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 MGEA5O60502 916 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 CUTAO60888 179 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 PPP1R37O75864 691 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 SERPINB8P50452 374 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ASIC1P78348 528 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 NLRP9Q7RTR0 991 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 TMTC2Q8N394 836 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 USP28Q96RU2 1077 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 INTS9Q9NV88 658 aaKnown RBP9.05□□□□□ -0.96
NECAP1-227ENST00000640648 KCNH3Q9ULD8 1083 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 STK38LQ9Y2H1 464 aa9.05□□□□□ -0.96
NECAP1-227ENST00000640648 ADAMTS2O95450 1211 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 MCM7P33993 719 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 GYS2P54840 703 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 USH1GQ495M9 461 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 HEATR3Q7Z4Q2 680 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 KBTBD3Q8NAB2 608 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 KIAA0232Q92628 1395 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 GOLGA8QA0A0J9YX86 632 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 GOLGA8OA6NCC3 632 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 VWA3AA6NCI4 1184 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 GOLGA8NF8WBI6 632 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 TBCAO75347 108 aaKnown RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 CTCFP49711 727 aaPredicted RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 KRT72Q14CN4 511 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ATP2A3Q93084 1043 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 DNAI2Q9GZS0 605 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms