RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 RAVER2Q9HCJ3 691 aaKnown RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 ADAMTS5Q9UNA0 930 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 SLC12A7Q9Y666 1083 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 ZNF536O15090 1300 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 GOLGA8BA8MQT2 603 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 CYTH3O43739 400 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 AK2P54819 239 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 MOV10L1Q9BXT6 1211 aaKnown RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 AGXT2Q9BYV1 514 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 FKTNO75072 461 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 DDAH1O94760 285 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 LARGE1O95461 756 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 CDC27P30260 824 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 NEK4P51957 841 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 BTNL9Q6UXG8 535 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 ADGRF4Q8IZF3 695 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
SCARB2-222ENST00000640634 CWC22Q9HCG8 908 aaKnown RBP12.75□□□□□ -0.37
SCARB2-222ENST00000640634 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
SCARB2-222ENST00000640634 STK3Q13188 491 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 MGAMO43451 1857 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 BAZ2BQ9UIF8 2168 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 ZBTB43O43298 467 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 DHX16O60231 1041 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 CD2BP2O95400 341 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 PSMC4P43686 418 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 WDR78Q5VTH9 848 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 FAM160B2Q86V87 743 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 HOMER1Q86YM7 354 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
SCARB2-222ENST00000640634 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
SCARB2-222ENST00000640634 PLXNB2O15031 1838 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 PLA2G6O60733 806 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 ERCC3P19447 782 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
SCARB2-222ENST00000640634 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
SCARB2-222ENST00000640634 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
SCARB2-222ENST00000640634 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-222ENST00000640634 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 FBXL16Q8N461 479 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 FANCBQ8NB91 859 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 CTCFLQ8NI51 663 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-222ENST00000640634 PIGSQ96S52 555 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 GABRQQ9UN88 632 aa12.73□□□□□ -0.37
SCARB2-222ENST00000640634 ZBED4O75132 1171 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-222ENST00000640634 STAT3P40763 770 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 RTN1Q16799 776 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 USH1GQ495M9 461 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 NOM1Q5C9Z4 860 aaKnown RBP12.72□□□□□ -0.37
SCARB2-222ENST00000640634 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
SCARB2-222ENST00000640634 DOCK3Q8IZD9 2030 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
SCARB2-222ENST00000640634 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
SCARB2-222ENST00000640634 EVCP57679 992 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 PRKCZQ05513 592 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 FUT2Q10981 343 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 MUM1L1Q5H9M0 696 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
SCARB2-222ENST00000640634 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms