RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 QSER1Q2KHR3 1735 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 INPP5BP32019 993 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 KCTD2Q14681 263 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 TAF1CQ15572 869 aaPredicted RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 MIGA2Q7L4E1 593 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 COA7Q96BR5 231 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SCLT1Q96NL6 688 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 TMEM39BQ9GZU3 492 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 NUCKS1Q9H1E3 243 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 VCPKMTQ9H867 229 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SPC25Q9HBM1 224 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 TCP11L1Q9NUJ3 509 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 GEMIN8Q9NWZ8 242 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 TUBBP07437 444 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 CCDC175P0C221 793 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SMARCA1P28370 1054 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 COG2Q14746 738 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 ZKSCAN8Q15776 578 aaPredicted RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 ZSCAN26Q16670 478 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 DAAM2Q86T65 1068 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 LMNTD2Q8IXW0 634 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 CCDC43Q96MW1 224 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 TBC1D32Q96NH3 1257 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SEC62Q99442 399 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 UPF3BQ9BZI7 483 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 CCDC194A0A1B0GVG4 234 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 PRKAB2O43741 272 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 OPA1O60313 960 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SLC25A27O95847 323 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 RPS6KB1P23443 525 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 ZNF76P36508 570 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 ARHGAP25P42331 645 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 TRPM4Q8TD43 1214 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 OTUD5Q96G74 571 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 AMNQ9BXJ7 453 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 CCL15-CCL14A0A0B4J2E2 113 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SATB1Q01826 763 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 CCL15Q16663 113 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 ZNF654Q8IZM8 581 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 MXD3Q9BW11 206 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 LSG1Q9H089 658 aaKnown RBP6.37□□□□□ -1.39
RTTN-218ENST00000640408 KIAA1683Q9H0B3 1180 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 PGAP2Q9UHJ9 254 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 JRKLQ9Y4A0 524 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 ANKRD36CQ5JPF3 1778 aa6.37□□□□□ -1.39
RTTN-218ENST00000640408 SPDYE5A6NIY4 337 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 M0R2C6 588 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 RIOK3O14730 519 aaKnown RBP6.36□□□□□ -1.39
RTTN-218ENST00000640408 NFIAQ12857 509 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 PPP1R9BQ96SB3 815 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
RTTN-218ENST00000640408 CEP131Q9UPN4 1083 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 ATRNL1Q5VV63 1379 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 SPDYE3A6NKU9 549 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 SMC1AQ14683 1233 aaKnown RBP6.36□□□□□ -1.39
RTTN-218ENST00000640408 HDXQ7Z353 690 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 GTF3C6Q969F1 213 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 UBE2Q2LH0YL09 131 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 CYP21A2P08686 494 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 TXLNAP40222 546 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 STAT2P52630 851 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 NECTIN1Q15223 517 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 NOL9Q5SY16 702 aaKnown RBP6.36□□□□□ -1.39
RTTN-218ENST00000640408 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 CCDC114Q96M63 670 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 TACO1Q9BSH4 297 aaKnown RBP6.36□□□□□ -1.39
RTTN-218ENST00000640408 DEXIO95424 95 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 PRMT2P55345 433 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 NLRP5P59047 1200 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 SEPT2Q15019 361 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 C8orf76Q96K31 380 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 ELP3Q9H9T3 547 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 MTMR4Q9NYA4 1195 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 DKC1O60832 514 aaKnown RBP eCLIP6.36□□□□□ -1.39
RTTN-218ENST00000640408 BACE1P56817 501 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 CTDSPL2Q05D32 466 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 PLS1Q14651 629 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 SYCP1Q15431 976 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 Q6ZUG5 572 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 CREBZFQ9NS37 354 aa6.36□□□□□ -1.39
RTTN-218ENST00000640408 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 TRIM75PA6NK02 468 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 F5H6K3 240 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 HSF2BPO75031 334 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 GDF11O95390 407 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 IRX5P78411 483 aaPredicted RBP6.35□□□□□ -1.39
RTTN-218ENST00000640408 KLRC3Q07444 240 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 FBXO11Q86XK2 927 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 KLRG1Q96E93 195 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
RTTN-218ENST00000640408 CDHR1Q96JP9 859 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 LUC7LQ9NQ29 371 aaKnown RBP6.35□□□□□ -1.39
RTTN-218ENST00000640408 BCORQ6W2J9 1755 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 KLRF2D3W0D1 207 aa6.35□□□□□ -1.39
RTTN-218ENST00000640408 BIRC2Q13490 618 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms