RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ARSIQ5FYB1 569 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 TREML2Q5T2D2 321 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 ZBTB44Q8NCP5 570 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 SHCBP1Q8NEM2 672 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 VWCEQ96DN2 955 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 WNT8AQ9H1J5 351 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 GINM1Q9NU53 330 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 TEP1Q99973 2627 aaKnown RBP4.57□□□□□ -1.68
CCDC7-213ENST00000639290 PTPRSQ13332 1948 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 PTPN13Q12923 2485 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 C5orf67F2Z3F1 127 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 HTATSF1O43719 755 aaKnown RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 TBX10O75333 385 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 SUPT20HL2P0C7V6 817 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 CRKP46108 304 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 RRP1P56182 461 aaKnown RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 HERVK_113P62684 666 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 HYAL1Q12794 435 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 PHLDB3Q6NSJ2 640 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 PRR23CQ6ZRP0 262 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 ZNF804AQ7Z570 1209 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 WBP1Q96G27 269 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 ZDHHC15Q96MV8 337 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 AS3MTQ9HBK9 375 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 ZSCAN32Q9NX65 697 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 DIS3Q9Y2L1 958 aaKnown RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 USP15Q9Y4E8 981 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 A0A1B0GTL3 188 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 ZNF316A6NFI3 1004 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 GJB5O95377 273 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 CYP2C19P33261 490 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 CSRP3P50461 194 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 KANK3Q6NY19 840 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 ZNF843Q8N446 348 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 PARD6AQ9NPB6 346 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 DBF4Q9UBU7 674 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-213ENST00000639290 INSL6Q9Y581 213 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 DMXL1Q9Y485 3027 aa4.56□□□□□ -1.68
CCDC7-213ENST00000639290 TROAPQ12815 778 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 GPM6BQ13491 265 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 NECTIN4Q96NY8 510 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 ISCA1Q9BUE6 129 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 OSBPL5Q9H0X9 879 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-213ENST00000639290 RBPJLQ9UBG7 517 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 DKK4Q9UBT3 224 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 MINPP1Q9UNW1 487 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 PCDHAC2Q9Y5I4 1007 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-213ENST00000639290 ABHD14A-ACY1A0A1B0GW23 586 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 C19orf81C9J6K1 198 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 SRGAP2BP0DMP2 458 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 HTRA4P83105 476 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-213ENST00000639290 LRP10Q7Z4F1 713 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 NPLOC4Q8TAT6 608 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 CDCA3Q99618 268 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-213ENST00000639290 SPC25Q9HBM1 224 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 RAB23Q9ULC3 237 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 MYO18BQ8IUG5 2567 aa4.55□□□□□ -1.68
CCDC7-213ENST00000639290 EP300Q09472 2414 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-213ENST00000639290 KCNQ3O43525 872 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TBC1D12O60347 775 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 DUSP11O75319 330 aaKnown RBP4.54□□□□□ -1.68
CCDC7-213ENST00000639290 ZNF280CQ8ND82 737 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TEKT1Q969V4 418 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TESK2Q96S53 571 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 ZBED2Q9BTP6 218 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 WDR18Q9BV38 432 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 ATG2AQ2TAZ0 1938 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 CHD7Q9P2D1 2997 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 H0Y626 953 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 IRS4O14654 1257 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TRIM16O95361 564 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 BRD1O95696 1058 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 NDUFV1P49821 464 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 NAALADL2Q58DX5 795 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 COPS6Q7L5N1 327 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 CELF5Q8N6W0 485 aaKnown RBP4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TBC1D22AQ8WUA7 517 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 CRBNQ96SW2 442 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 PORCNQ9H237 461 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 WNT16Q9UBV4 365 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TTF2Q9UNY4 1162 aaKnown RBP4.54□□□□□ -1.68
CCDC7-213ENST00000639290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-213ENST00000639290 DOPEY1Q5JWR5 2465 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 SYNRGQ9UMZ2 1314 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 XIRP2A4UGR9 3374 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 PATJQ8NI35 1801 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 MYO9AB2RTY4 2548 aa4.54□□□□□ -1.68
CCDC7-213ENST00000639290 PDE8AO60658 829 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 WDR5P61964 334 aaKnown RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 EPC2Q52LR7 807 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 C11orf84Q9BUA3 381 aaPredicted RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 TXNRD2Q9NNW7 524 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 TMOD4Q9NZQ9 345 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 CLEC1BQ9P126 229 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 ANKMY1Q9P2S6 941 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 CSRP1P21291 193 aaKnown RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 GJA9P57773 515 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms