RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ZNF214Q9UL59 606 aaPredicted RBP6.61□□□□□ -1.35
PDE4D-229ENST00000638939 PPP1R9AQ9ULJ8 1098 aa6.61□□□□□ -1.35
PDE4D-229ENST00000638939 PLIN4Q96Q06 1357 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 SYNRGQ9UMZ2 1314 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
PDE4D-229ENST00000638939 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 VWA5AO00534 786 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 KIAA0355O15063 1070 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 IFIT2P09913 472 aaKnown RBP6.6□□□□□ -1.35
PDE4D-229ENST00000638939 AKR1A1P14550 325 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 ATP5JP18859 108 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 ADCYAP1R1P41586 468 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 HNRNPUQ00839 825 aaKnown RBP eCLIP6.6□□□□□ -1.35
PDE4D-229ENST00000638939 PLS1Q14651 629 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 KCTD2Q14681 263 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 UBE3CQ15386 1083 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 SHHQ15465 462 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 ZNF792Q3KQV3 632 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 C9orf50Q5SZB4 431 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 RNF180Q86T96 592 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 SPICE1Q8N0Z3 855 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 REPS2Q8NFH8 660 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 PANK1Q8TE04 598 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 DYNLL2Q96FJ2 89 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 DCBLD2Q96PD2 775 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 MMP19Q99542 508 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 HAUS7Q99871 368 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 TINF2Q9BSI4 451 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 TEX13BQ9BXU2 312 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 ARMT1Q9H993 441 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 KANSL2Q9H9L4 492 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 PRDM5Q9NQX1 630 aaPredicted RBP6.6□□□□□ -1.35
PDE4D-229ENST00000638939 ARPP21Q9UBL0 812 aaPredicted RBP6.6□□□□□ -1.35
PDE4D-229ENST00000638939 DDX19BQ9UMR2 479 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 SYNPO2Q9UMS6 1093 aa6.6□□□□□ -1.35
PDE4D-229ENST00000638939 MROH7Q68CQ1 1323 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TRIP12Q14669 1992 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 DNAJC25-GNG10A0A024R161 153 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TRIM43BA6NCK2 446 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 MOXD2PA6NHM9 499 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ATP2A1O14983 1001 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 CLTBP09497 229 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 C7P10643 843 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 EEF2P13639 858 aaKnown RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 CDK8P49336 464 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ANO1Q5XXA6 986 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ZSCAN25Q6NSZ9 544 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ANKRD33Q7Z3H0 272 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 SIRT2Q8IXJ6 389 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 MAFAQ8NHW3 353 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 BADQ92934 168 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TRIM43Q96BQ3 446 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 CDX2Q99626 313 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TTYH1Q9H313 450 aaPredicted RBP6.59□□□□□ -1.35
PDE4D-229ENST00000638939 ZBTB40Q9NUA8 1239 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 FBXO28Q9NVF7 368 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 TACC3Q9Y6A5 838 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 SIP14410 1827 aa6.59□□□□□ -1.35
PDE4D-229ENST00000638939 BRWD1Q9NSI6 2320 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 CYP2D7A0A087X1C5 515 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 USP17L12C9JPN9 530 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 USP17L21D6R901 530 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 PRKAB2O43741 272 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 PGK1P00558 417 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 ZNF865P0CJ78 1059 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-229ENST00000638939 STAT3P40763 770 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 TLE2Q04725 743 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 FPGSQ05932 587 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 TUSC1Q2TAM9 212 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 SBK1Q52WX2 424 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 PRAMEF19Q5SWL8 479 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 FAM83BQ5T0W9 1011 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 MYSM1Q5VVJ2 828 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 GIMAP6Q6P9H5 292 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 CTR9Q6PD62 1173 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 MAMDC4Q6UXC1 1216 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 NUP133Q8WUM0 1156 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 RNPC3Q96LT9 517 aaKnown RBP6.58□□□□□ -1.36
PDE4D-229ENST00000638939 TOX2Q96NM4 488 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 SLF1Q9BQI6 1058 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-229ENST00000638939 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 CHMP4BQ9H444 224 aaKnown RBP6.58□□□□□ -1.36
PDE4D-229ENST00000638939 NPDC1Q9NQX5 325 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-229ENST00000638939 CNPY2Q9Y2B0 182 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 MYH7BA7E2Y1 1941 aa6.58□□□□□ -1.36
PDE4D-229ENST00000638939 ELP1O95163 1332 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 SMIM22K7EJ46 135 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 PQBP1O60828 265 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 DUSP11O75319 330 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 PGK2P07205 417 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms