RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
ATM-227ENST00000638786 PCDHGB7Q9Y5F8 929 aa8.86□□□□□ -0.99
ATM-227ENST00000638786 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
ATM-227ENST00000638786 NWD2Q9ULI1 1742 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 GREM1O60565 184 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 LEFTY1O75610 366 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 SSTR4P31391 388 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 MPP2Q14168 576 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 VPS72Q15906 364 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 NKG7Q16617 165 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 ARMCX6Q7L4S7 300 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 DUSP23Q9BVJ7 150 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 CORINQ9Y5Q5 1042 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 RGPD5Q99666 1765 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 MYOM1P52179 1685 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
ATM-227ENST00000638786 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 CYP26A1O43174 497 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 COBLO75128 1261 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 PLCG1P19174 1290 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 GRIK1P39086 918 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 EVA1CP58658 441 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 SLBPQ14493 270 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATM-227ENST00000638786 CPSF6Q16630 551 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATM-227ENST00000638786 EDC4Q6P2E9 1401 aaKnown RBP8.84□□□□□ -0.99
ATM-227ENST00000638786 PUS7Q96PZ0 661 aaKnown RBP8.84□□□□□ -0.99
ATM-227ENST00000638786 SPON2Q9BUD6 331 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 FOXQ1Q9C009 403 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 PRDM10Q9NQV6 1147 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 SLIT3O75094 1523 aa8.84□□□□□ -0.99
ATM-227ENST00000638786 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
ATM-227ENST00000638786 LRIG2O94898 1065 aa8.83□□□□□ -1
ATM-227ENST00000638786 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
ATM-227ENST00000638786 CWF19L2Q2TBE0 894 aaKnown RBP8.83□□□□□ -1
ATM-227ENST00000638786 INTS5Q6P9B9 1019 aaKnown RBP8.83□□□□□ -1
ATM-227ENST00000638786 REC114Q7Z4M0 266 aa8.83□□□□□ -1
ATM-227ENST00000638786 KIAA0825Q8IV33 1275 aa8.83□□□□□ -1
ATM-227ENST00000638786 UBP1Q9NZI7 540 aa8.83□□□□□ -1
ATM-227ENST00000638786 SPATA31A5Q5VU36 1347 aa8.82□□□□□ -1
ATM-227ENST00000638786 SPATA31A7Q8IWB4 1347 aa8.82□□□□□ -1
ATM-227ENST00000638786 LMO7Q8WWI1 1683 aa8.82□□□□□ -1
ATM-227ENST00000638786 COL18A1P39060 1754 aa8.82□□□□□ -1
ATM-227ENST00000638786 NFAT5O94916 1531 aa8.82□□□□□ -1
ATM-227ENST00000638786 HOXA10P31260 410 aaPredicted RBP8.82□□□□□ -1
ATM-227ENST00000638786 APOBRQ0VD83 1088 aa8.82□□□□□ -1
ATM-227ENST00000638786 ARHGEF25Q86VW2 580 aa8.82□□□□□ -1
ATM-227ENST00000638786 METTL16Q86W50 562 aaKnown RBP8.82□□□□□ -1
ATM-227ENST00000638786 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
ATM-227ENST00000638786 XAGE3Q8WTP9 111 aa8.82□□□□□ -1
ATM-227ENST00000638786 TJP2Q9UDY2 1190 aa8.82□□□□□ -1
ATM-227ENST00000638786 DDX41Q9UJV9 622 aaKnown RBP8.82□□□□□ -1
ATM-227ENST00000638786 POLR3KQ9Y2Y1 108 aaPredicted RBP8.82□□□□□ -1
ATM-227ENST00000638786 CPDO75976 1380 aa8.82□□□□□ -1
ATM-227ENST00000638786 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
ATM-227ENST00000638786 CDK12Q9NYV4 1490 aaPredicted RBP8.82□□□□□ -1
ATM-227ENST00000638786 LTN1O94822 1766 aa8.81□□□□□ -1
ATM-227ENST00000638786 FYB1O15117 783 aa8.81□□□□□ -1
ATM-227ENST00000638786 FOSL1P15407 271 aa8.81□□□□□ -1
ATM-227ENST00000638786 CAP2P40123 477 aa8.81□□□□□ -1
ATM-227ENST00000638786 CRKP46108 304 aa8.81□□□□□ -1
ATM-227ENST00000638786 RACK1P63244 317 aaKnown RBP8.81□□□□□ -1
ATM-227ENST00000638786 SEZ6Q53EL9 994 aa8.81□□□□□ -1
ATM-227ENST00000638786 PRAMEF13Q5VWM6 474 aa8.81□□□□□ -1
ATM-227ENST00000638786 SLC6A19Q695T7 634 aa8.81□□□□□ -1
ATM-227ENST00000638786 TMEM87BQ96K49 555 aa8.81□□□□□ -1
ATM-227ENST00000638786 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
ATM-227ENST00000638786 ADAM30Q9UKF2 790 aa8.81□□□□□ -1
ATM-227ENST00000638786 SPATA31A1Q5TZJ5 1347 aa8.8□□□□□ -1
ATM-227ENST00000638786 NSD3Q9BZ95 1437 aa8.8□□□□□ -1
ATM-227ENST00000638786 MED26O95402 600 aa8.8□□□□□ -1
ATM-227ENST00000638786 CST3P01034 146 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 MCM4P33991 863 aa8.8□□□□□ -1
ATM-227ENST00000638786 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
ATM-227ENST00000638786 MRPL41Q8IXM3 137 aaKnown RBP8.8□□□□□ -1
ATM-227ENST00000638786 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
ATM-227ENST00000638786 MFSD2AQ8NA29 543 aa8.8□□□□□ -1
ATM-227ENST00000638786 KCNH5Q8NCM2 988 aa8.8□□□□□ -1
ATM-227ENST00000638786 NKD1Q969G9 470 aa8.8□□□□□ -1
ATM-227ENST00000638786 ACSF2Q96CM8 615 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 LTV1Q96GA3 475 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 COG3Q96JB2 828 aa8.8□□□□□ -1
ATM-227ENST00000638786 EAF1Q96JC9 268 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 MIPEPQ99797 713 aa8.8□□□□□ -1
ATM-227ENST00000638786 DPH2Q9BQC3 489 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 NT5C1AQ9BXI3 368 aa8.8□□□□□ -1
ATM-227ENST00000638786 LRRC3Q9BY71 257 aa8.8□□□□□ -1
ATM-227ENST00000638786 PANK3Q9H999 370 aa8.8□□□□□ -1
ATM-227ENST00000638786 PCMTD2Q9NV79 361 aa8.8□□□□□ -1
ATM-227ENST00000638786 REV1Q9UBZ9 1251 aa8.8□□□□□ -1
ATM-227ENST00000638786 AATKQ6ZMQ8 1374 aa8.8□□□□□ -1
ATM-227ENST00000638786 NINLQ9Y2I6 1382 aa8.8□□□□□ -1
ATM-227ENST00000638786 COL5A2P05997 1499 aaPredicted RBP8.8□□□□□ -1
ATM-227ENST00000638786 KIF20BQ96Q89 1820 aa8.8□□□□□ -1
ATM-227ENST00000638786 OVOS2A0A0J9YW53 1432 aa8.8□□□□□ -1
ATM-227ENST00000638786 OVOS2Q6IE36 1432 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms