RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 PDCD6IPQ8WUM4 868 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 LZICQ8WZA0 190 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 SRPK1Q96SB4 655 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 PRDM1O75626 825 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 RASSF2P50749 326 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 RNF219Q5W0B1 726 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 IFT20Q8IY31 132 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 AS3MTQ9HBK9 375 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 HPS4Q9NQG7 708 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 KIAA0586Q9BVV6 1533 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 PGBD3Q8N328 593 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 PLCH2O75038 1416 aa17.86■□□□□ 0.45
CACNA1A-258ENST00000638029 STX2P32856 288 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 C7orf31Q8N865 590 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 EPHB1P54762 984 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 GTF2IP78347 998 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 METTL23Q86XA0 190 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 NLRP7Q8WX94 980 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 KDRP35968 1356 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 A6NJR5 290 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 RASIP1Q5U651 963 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 FAM186BQ8IYM0 893 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 LMNB1P20700 586 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 MAP3K7CLP57077 242 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 CFAP61Q8NHU2 1237 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 TTC4O95801 387 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 TUBB4AP04350 444 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 STAMQ92783 540 aa17.85■□□□□ 0.45
CACNA1A-258ENST00000638029 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 PYGLP06737 847 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ARHGAP4P98171 946 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 SNX29Q8TEQ0 813 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 MAP3K5Q99683 1374 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ZBTB8OSQ8IWT0 167 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 BTN2A2Q8WVV5 523 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 RTEL1Q9NZ71 1219 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 DDAH1O94760 285 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 KCNA1Q09470 495 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 WBP4O75554 376 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 FLOT1O75955 427 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ADCY8P40145 1251 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 PEX26Q7Z412 305 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 CSGALNACT2Q8N6G5 542 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ZCWPW1Q9H0M4 648 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 BLZF1Q9H2G9 400 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ARHGDIAP52565 204 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 ZC3H12BQ5HYM0 836 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 CABS1Q96KC9 395 aa17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 NAPGQ99747 312 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-258ENST00000638029 LLGL1Q15334 1064 aa17.83■□□□□ 0.45
CACNA1A-258ENST00000638029 ABHD8Q96I13 439 aa17.83■□□□□ 0.45
CACNA1A-258ENST00000638029 ARHGAP25P42331 645 aa17.83■□□□□ 0.45
CACNA1A-258ENST00000638029 ELF2Q15723 593 aa17.83■□□□□ 0.45
CACNA1A-258ENST00000638029 CYP26C1Q6V0L0 522 aa17.83■□□□□ 0.45
CACNA1A-258ENST00000638029 GOLGA8CPA6NN73 597 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 XKR9Q5GH70 373 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 RAD18Q9NS91 495 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 CLTAP09496 248 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 ATP1A2P50993 1020 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 ELMOD1Q8N336 334 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 MRPL50Q8N5N7 158 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 USP40Q9NVE5 1235 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 POC1B-GALNT4F8VUJ3 575 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 ZNF594Q96JF6 807 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 TROVE2P10155 538 aaKnown RBP eCLIP17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 OAS2P29728 719 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 RAD50Q92878 1312 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 SYNRGQ9UMZ2 1314 aa17.83■□□□□ 0.44
CACNA1A-258ENST00000638029 OSTNP61366 133 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 PTPREP23469 700 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 FAM47AQ5JRC9 791 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 ITGA6P23229 1130 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 NLRC4Q9NPP4 1024 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 BUB1O43683 1085 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 CCNYQ8ND76 341 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 C14orf93Q9H972 538 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms