RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	FAM184B	Q9ULE4	1060 aa		11.23	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MROH7	Q68CQ1	1323 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	USP17L12	C9JPN9	530 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	USP17L21	D6R901	530 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	COL9A1	P20849	921 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	PBX2	P40425	430 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	PPIG	Q13427	754 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MCMDC2	Q4G0Z9	681 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MFSD5	Q6N075	450 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	CCDC129	Q6ZRS4	1044 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	C16orf86	Q6ZW13	317 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MSL3	Q8N5Y2	521 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	REPS2	Q8NFH8	660 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	PPM1E	Q8WY54	764 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	TBX21	Q9UL17	535 aa		11.22	□□□□□ -0.61
CACNA1A-256	ENST00000637981	SYNGAP1	Q96PV0	1343 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MYADML2	A6NDP7	307 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	GRXCR1	A8MXD5	290 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	HAX1	O00165	279 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	EIF5B	O60841	1220 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	SNAI1	O95863	264 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	C6orf222	P0C671	652 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	TMEM240	Q5SV17	173 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	CCDC174	Q6PII3	467 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	OSBP2	Q969R2	916 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	VTI1A	Q96AJ9	217 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	DDX11	Q96FC9	970 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	GLT1D1	Q96MS3	346 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	TEX13B	Q9BXU2	312 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	PBX4	Q9BYU1	374 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	NACAP1	Q9BZK3	213 aa		11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	PUS7L	Q9H0K6	701 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-256	ENST00000637981	MUC3A	Q02505	3323 aa		11.21	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ELP1	O95163	1332 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RAD50	Q92878	1312 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	DNAJC25-GNG10	A0A024R161	153 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GPAA1	O43292	621 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	DUSP11	O75319	330 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CDC45	O75419	566 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ASGR1	P07306	291 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CSF2RA	P15509	400 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CST5	P28325	142 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLC4A3	P48751	1232 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CDK7	P50613	346 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	IRX5	P78411	483 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SNRNP48	Q6IEG0	339 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GIMAP6	Q6P9H5	292 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CWC27	Q6UX04	472 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MAMDC4	Q6UXC1	1216 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	C16orf59	Q7L2K0	433 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	TMEM199	Q8N511	208 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PCSK9	Q8NBP7	692 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	STRBP	Q96SI9	672 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NUP88	Q99567	741 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLF1	Q9BQI6	1058 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PRDM12	Q9H4Q4	367 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SPC25	Q9HBM1	224 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RIPK3	Q9Y572	518 aa		11.2	□□□□□ -0.62
CACNA1A-256	ENST00000637981		A0A0U1RQG5	324 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PATL2	C9JE40	543 aa	Known RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ARVCF	O00192	962 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ADCY6	O43306	1168 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	APP	P05067	770 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ACR	P10323	421 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CHML	P26374	656 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NMI	Q13287	307 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ACVR2B	Q13705	512 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	AKNAD1	Q5T1N1	836 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RASIP1	Q5U651	963 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CTR9	Q6PD62	1173 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ZNF365	Q70YC5	407 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SKAP1	Q86WV1	359 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CPXCR1	Q8N123	301 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ASB2	Q96Q27	587 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PPP1R12C	Q9BZL4	782 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	THEG	Q9P2T0	379 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLC4A4	Q9Y6R1	1079 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CCDC171	Q6TFL3	1326 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MYH4	Q9Y623	1939 aa		11.19	□□□□□ -0.62
CACNA1A-256	ENST00000637981		A0A0D9SFI3	127 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981		M0R2C6	588 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	TLR3	O15455	904 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FXR2	P51116	673 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GJA9	P57773	515 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CCDC85B	Q15834	202 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CCDC144B	Q3MJ40	725 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GNAS	Q5JWF2	1037 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	KIAA1211	Q6ZU35	1233 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FAM126B	Q8IXS8	530 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PRPF38A	Q8NAV1	312 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FAM227B	Q96M60	508 aa		11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	UPF3A	Q9H1J1	476 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ABHD16B	Q9H3Z7	469 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms