RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PRR12Q9ULL5 1215 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 NR2E3Q9Y5X4 410 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 TAF6LQ9Y6J9 622 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 CCDC171Q6TFL3 1326 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 LRRC37A2A6NM11 1700 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 RBAK-RBAKDNI3L0D1 243 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 PLA2G6O60733 806 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 PGK1P00558 417 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 SNHG28P0DPA3 235 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 SLC16A2P36021 539 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 COL9A3Q14050 684 aaPredicted RBP9.29□□□□□ -0.92
PNKP-229ENST00000637897 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
PNKP-229ENST00000637897 BTNL9Q6UXG8 535 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 SLC39A5Q6ZMH5 540 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 KLHDC9Q8NEP7 349 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 RILPL2Q969X0 211 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 A1CFQ9NQ94 594 aaKnown RBP9.29□□□□□ -0.92
PNKP-229ENST00000637897 TCP11L1Q9NUJ3 509 aa9.29□□□□□ -0.92
PNKP-229ENST00000637897 CDH23Q9H251 3354 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.28□□□□□ -0.92
PNKP-229ENST00000637897 TRIM43BA6NCK2 446 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 TSPY2A6NKD2 308 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 RANBP6O60518 1105 aaKnown RBP9.28□□□□□ -0.92
PNKP-229ENST00000637897 MSCO60682 206 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 ADCYAP1R1P41586 468 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 OAZ1P54368 228 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 RTP1P59025 263 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 KCTD2Q14681 263 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 CWC27Q6UX04 472 aaKnown RBP9.28□□□□□ -0.92
PNKP-229ENST00000637897 TICAM2Q86XR7 235 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 TRIM43Q96BQ3 446 aaPredicted RBP9.28□□□□□ -0.92
PNKP-229ENST00000637897 RANBP17Q9H2T7 1088 aaKnown RBP9.28□□□□□ -0.92
PNKP-229ENST00000637897 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 NRBP1Q9UHY1 535 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 PHF24Q9UPV7 400 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 LAMA4Q16363 1823 aa9.28□□□□□ -0.92
PNKP-229ENST00000637897 ZBED4O75132 1171 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 PDHBP11177 359 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 SLC1A4P43007 532 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 SLC4A3P48751 1232 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 STAT2P52630 851 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
PNKP-229ENST00000637897 TRIM60Q495X7 471 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 RRP12Q5JTH9 1297 aaKnown RBP9.27□□□□□ -0.93
PNKP-229ENST00000637897 AKNAD1Q5T1N1 836 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
PNKP-229ENST00000637897 SKAP1Q86WV1 359 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 CCDC144CPQ8IYA2 1237 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 CLEC4DQ8WXI8 215 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 ZKSCAN3Q9BRR0 538 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 ZNF287Q9HBT7 754 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 HOMER2Q9NSB8 354 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
PNKP-229ENST00000637897 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 FRMPD2Q68DX3 1309 aaPredicted RBP9.27□□□□□ -0.93
PNKP-229ENST00000637897 SYNGAP1Q96PV0 1343 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 SYNRGQ9UMZ2 1314 aa9.27□□□□□ -0.93
PNKP-229ENST00000637897 A0A1W2PPC1 479 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 NFIBO00712 420 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 COPB2P35606 906 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 EPHB4P54760 987 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 NKX3-2P78367 333 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 PTH1RQ03431 593 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 ACVR2BQ13705 512 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 TTC22Q5TAA0 569 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 C1orf53Q5VUE5 145 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 TAPT1Q6NXT6 567 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 CCDC174Q6PII3 467 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 ARMCX2Q7L311 632 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 FAM160B2Q86V87 743 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
PNKP-229ENST00000637897 ANKS1AQ92625 1134 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 XPNPEP3Q9NQH7 507 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 PDLIM7Q9NR12 457 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 PDGFCQ9NRA1 345 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 RNF146Q9NTX7 359 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 CYP39A1Q9NYL5 469 aa9.26□□□□□ -0.93
PNKP-229ENST00000637897 A0A1W2PQ45 241 aaPredicted RBP9.25□□□□□ -0.93
PNKP-229ENST00000637897 A0A1W2PQY0 241 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 B4E1Z4 1266 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 SLC3A2P08195 630 aaKnown RBP9.25□□□□□ -0.93
PNKP-229ENST00000637897 TOP1P11387 765 aaKnown RBP9.25□□□□□ -0.93
PNKP-229ENST00000637897 AKR1A1P14550 325 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 TLE2Q04725 743 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 CCDC144BQ3MJ40 725 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 LRIT3Q3SXY7 679 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 C9orf50Q5SZB4 431 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 SYDE2Q5VT97 1194 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 Q7L0L9 218 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 CYB5R4Q7L1T6 521 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 ARRDC4Q8NCT1 418 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 MORC4Q8TE76 937 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms