RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 HIP1O00291 1037 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 SOX1O00570 391 aaPredicted RBP15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 MCCP23508 829 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 SLC4A3P48751 1232 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 MDM2Q00987 491 aaPredicted RBP15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 FAM227BQ96M60 508 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 RNF41Q9H4P4 317 aaPredicted RBP15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 SPC25Q9HBM1 224 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 PNMA2Q9UL42 364 aa15.52■□□□□ 0.08
SYNGAP1-224ENST00000637721 ADAMTS4O75173 837 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 DUSP11O75319 330 aaKnown RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 SNAI1O95863 264 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 NUCB1Q02818 461 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 NMIQ13287 307 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 ACVR2BQ13705 512 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 NUP133Q8WUM0 1156 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 RILPL2Q969X0 211 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 LRCH3Q96II8 777 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 TTC14Q96N46 770 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 TOMM22Q9NS69 142 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 RNF146Q9NTX7 359 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 LTBP2Q14767 1821 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 MCM3APO60318 1980 aa15.51■□□□□ 0.07
SYNGAP1-224ENST00000637721 ZNF536O15090 1300 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 ASB14A6NK59 587 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 PGK1P00558 417 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 SDSP20132 328 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 CST5P28325 142 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 TRIM60Q495X7 471 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 MFSD6Q6ZSS7 791 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 KCTD1Q719H9 257 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 ARMCX2Q7L311 632 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 PCSK9Q8NBP7 692 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 KLHDC9Q8NEP7 349 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 FERMT2Q96AC1 680 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 TRERF1Q96PN7 1200 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
SYNGAP1-224ENST00000637721 SYNRGQ9UMZ2 1314 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 A0A1W2PQ45 241 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 A0A1W2PQY0 241 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 NMT2O60551 498 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCDC178Q5BJE1 867 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 ZNF589Q86UQ0 364 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 TOX2Q96NM4 488 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 A1CFQ9NQ94 594 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 INCENPQ9NQS7 918 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 PDLIM7Q9NR12 457 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 HOMER2Q9NSB8 354 aa15.49■□□□□ 0.07
SYNGAP1-224ENST00000637721 ELP1O95163 1332 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 MROH7Q68CQ1 1323 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 ICAM1P05362 532 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 ALAS1P13196 640 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 ACLYP53396 1101 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 GJA9P57773 515 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCDC96Q2M329 555 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 RRP12Q5JTH9 1297 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCDC144CPQ8IYA2 1237 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 ESR2Q92731 530 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 FGD4Q96M96 766 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 TMEM47Q9BQJ4 181 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 PRDM5Q9NQX1 630 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 STARD7Q9NQZ5 370 aa15.48■□□□□ 0.07
SYNGAP1-224ENST00000637721 A0A0C4DFX4 3053 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 ZNF213O14771 459 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 IGHDP01880 384 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 CLTBP09497 229 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 NKX3-2P78367 333 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 TLE2Q04725 743 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCSAPQ6IQ19 270 aaPredicted RBP15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 ANKRD33Q7Z3H0 272 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 GLT1D1Q96MS3 346 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 KATNBL1Q9H079 304 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 UPF3AQ9H1J1 476 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 ADD3Q9UEY8 706 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 CCPG1Q9ULG6 757 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 LAMA4Q16363 1823 aa15.47■□□□□ 0.07
SYNGAP1-224ENST00000637721 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-224ENST00000637721 KCNA10Q16322 511 aa15.46■□□□□ 0.07
SYNGAP1-224ENST00000637721 SYDE2Q5VT97 1194 aa15.46■□□□□ 0.07
SYNGAP1-224ENST00000637721 FAM109BQ6ICB4 259 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms