RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 TECP42680 631 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 TPM4P67936 248 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 CERKLQ49MI3 558 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-214ENST00000637709 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 INTS13Q9NVM9 706 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 COL4A5P29400 1685 aa17.39■□□□□ 0.38
SCN8A-214ENST00000637709 IKBKBO14920 756 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 CDK11BP21127 795 aaKnown RBP17.39■□□□□ 0.37
SCN8A-214ENST00000637709 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.37
SCN8A-214ENST00000637709 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 TDP2O95551 362 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 UQCRHP07919 91 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 TNNI2P48788 182 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 CCZ1BP86790 482 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-214ENST00000637709 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 SPTLC3Q9NUV7 552 aa17.39■□□□□ 0.37
SCN8A-214ENST00000637709 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 BMP15O95972 392 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 STAT6P42226 847 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 NONOQ15233 471 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCN8A-214ENST00000637709 GDAQ9Y2T3 454 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 PSMD14O00487 310 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 SLC37A4O43826 429 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 IGSF3O75054 1194 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 TPM3P06753 285 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 TXKP42681 527 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 NOVP48745 357 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 NAALADL2Q58DX5 795 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 SWAP70Q9UH65 585 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
SCN8A-214ENST00000637709 PLIN4Q96Q06 1357 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 SIAH1Q8IUQ4 282 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L15C9J2P7 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L13C9JLJ4 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L11C9JVI0 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L18D6R9N7 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L22D6RA61 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L17D6RBQ6 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L19D6RCP7 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L20D6RJB6 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 RBM10P98175 930 aaKnown RBP17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L24Q0WX57 530 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 USP17L6PQ6QN14 398 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 ZNF592Q92610 1267 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
SCN8A-214ENST00000637709 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
SCN8A-214ENST00000637709 EDIL3O43854 480 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 NEMFO60524 1076 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 GH2P01242 217 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 SNHG28P0DPA3 235 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 GNA11P29992 359 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 UBA7P41226 1012 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 SLC1A4P43007 532 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 IKQ13123 557 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-214ENST00000637709 KANK3Q6NY19 840 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-214ENST00000637709 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 DAGLBQ8NCG7 672 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 DISC1Q9NRI5 854 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 MYH7BA7E2Y1 1941 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 KCNA3P22001 575 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 ICA1Q05084 483 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 TPD52L1Q16890 204 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-214ENST00000637709 USH1GQ495M9 461 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
SCN8A-214ENST00000637709 POTEMA6NI47 508 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 ADCY7P51828 1080 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 ZYXQ15942 572 aaKnown RBP17.35■□□□□ 0.37
SCN8A-214ENST00000637709 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 HPS3Q969F9 1004 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
SCN8A-214ENST00000637709 ECE1P42892 770 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
SCN8A-214ENST00000637709 SERPINA10Q9UK55 444 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 SYNRGQ9UMZ2 1314 aa17.35■□□□□ 0.37
SCN8A-214ENST00000637709 TRIM49BA6NDI0 452 aa17.34■□□□□ 0.37
SCN8A-214ENST00000637709 TEX33O43247 280 aa17.34■□□□□ 0.37
SCN8A-214ENST00000637709 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
SCN8A-214ENST00000637709 PLCG1P19174 1290 aa17.34■□□□□ 0.37
SCN8A-214ENST00000637709 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
SCN8A-214ENST00000637709 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
SCN8A-214ENST00000637709 SLFN13Q68D06 897 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms