RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PNMA6FA0A0J9YX94 578 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 USP17L5A8MUK1 530 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 H0YCG3 227 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 PPP6R2O75170 966 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 ECE1P42892 770 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 AFMP43652 599 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 AP3B2Q13367 1082 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 SYDE2Q5VT97 1194 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 CTR9Q6PD62 1173 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 CDC37L1Q7L3B6 337 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 ZNF592Q92610 1267 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 AZI2Q9H6S1 392 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 IL1R1P14778 569 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CETN2P41208 172 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 PRELPP51888 382 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SCARF1Q14162 830 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 OTUD6AQ7L8S5 288 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 FILIP1Q7Z7B0 1213 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TEX2Q8IWB9 1127 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CCDC112Q8NEF3 446 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 FAM151AQ8WW52 585 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 BICD1Q96G01 975 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SLC4A9Q96Q91 983 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 OSBPL5Q9H0X9 879 aaPredicted RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 RTEL1Q9NZ71 1219 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ANAPC4Q9UJX5 808 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 FEM1BQ9UK73 627 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CCPG1Q9ULG6 757 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 LRP6O75581 1613 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 NOP56O00567 594 aaKnown RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 MYL1P05976 194 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 OR52Z1P0C646 297 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 LMNB1P20700 586 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CMA1P23946 247 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ABCD1P33897 745 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TYRO3Q06418 890 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TMTC3Q6ZXV5 915 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 EXOC8Q8IYI6 725 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TRIML1Q8N9V2 468 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SLC17A8Q8NDX2 589 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 RBM46Q8TBY0 533 aaKnown RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 IFT74Q96LB3 600 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 GPR101Q96P66 508 aaPredicted RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 TDRD3Q9H7E2 651 aaKnown RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 SPC25Q9HBM1 224 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 HOXC10Q9NYD6 342 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 KCNJ14Q9UNX9 436 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 FAM205AQ6ZU69 1335 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ATRNO75882 1429 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ARHGEF35A5YM69 484 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SNAP23O00161 211 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 BIN1O00499 593 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 N4BP3O15049 544 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 KIF4AO95239 1232 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SMARCA1P28370 1054 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TXKP42681 527 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 KCTD2Q14681 263 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 KIF4BQ2VIQ3 1234 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 USH1GQ495M9 461 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CDAN1Q8IWY9 1227 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SPC24Q8NBT2 197 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 SNX29Q8TEQ0 813 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD2-227ENST00000637572 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 USO1O60763 962 aaKnown RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 GAS7O60861 476 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 MMP1P03956 469 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TUBB4AP04350 444 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ALAS1P13196 640 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 CCAR2Q8N163 923 aaKnown RBP6.19□□□□□ -1.42
CHD2-227ENST00000637572 ZNF454Q8N9F8 522 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 PSMD1Q99460 953 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 MRIQ9BWK5 157 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 WDR11Q9BZH6 1224 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 PEAK1Q9H792 1746 aa6.19□□□□□ -1.42
CHD2-227ENST00000637572 TM4SF1P30408 202 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 MYL5Q02045 173 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 PRKG1Q13976 671 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 CABP7Q86V35 215 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 PNMA8AQ86V59 439 aaPredicted RBP6.18□□□□□ -1.42
CHD2-227ENST00000637572 ANKRD35Q8N283 1001 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 GTF3C2Q8WUA4 911 aaPredicted RBP6.18□□□□□ -1.42
CHD2-227ENST00000637572 LPAR1Q92633 364 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 SLC10A4Q96EP9 437 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 IMPG2Q9BZV3 1241 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 PCDHA12Q9UN75 941 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 DNM2P50570 870 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 LBX1P52954 281 aa6.18□□□□□ -1.42
CHD2-227ENST00000637572 GRM4Q14833 912 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms