RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
CLN6-220ENST00000637450 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.89■■□□□ 1.09
CLN6-220ENST00000637450 STX8Q9UNK0 236 aa21.89■■□□□ 1.09
CLN6-220ENST00000637450 ZNF536O15090 1300 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 SYNRGQ9UMZ2 1314 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 NMT2O60551 498 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 FGRP09769 529 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 NOVP48745 357 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 ACLYP53396 1101 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 SHHQ15465 462 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 RCSD1Q6JBY9 416 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 AGBL1Q96MI9 1066 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 HOMER2Q9NSB8 354 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 ISY1Q9ULR0 285 aaKnown RBP21.88■■□□□ 1.09
CLN6-220ENST00000637450 STXBP5LQ9Y2K9 1186 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 PLXNA1Q9UIW2 1896 aa21.88■■□□□ 1.09
CLN6-220ENST00000637450 MYH4Q9Y623 1939 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 MOXD2PA6NHM9 499 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 ORC4O43929 436 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 CLTBP09497 229 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 CNTN2Q02246 1040 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 IKQ13123 557 aaPredicted RBP21.87■■□□□ 1.09
CLN6-220ENST00000637450 KCNA10Q16322 511 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 ARMCX2Q7L311 632 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 CHMP4CQ96CF2 233 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
CLN6-220ENST00000637450 RANBP6O60518 1105 aaKnown RBP21.86■■□□□ 1.09
CLN6-220ENST00000637450 ITGB8P26012 769 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 TKFCQ3LXA3 575 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 CCDC144BQ3MJ40 725 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 MCMDC2Q4G0Z9 681 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 KCTD1Q719H9 257 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 ANKRD33Q7Z3H0 272 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 FAM133AQ8N9E0 248 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 FAM227BQ96M60 508 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 TOX2Q96NM4 488 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 STARD7Q9NQZ5 370 aa21.86■■□□□ 1.09
CLN6-220ENST00000637450 MYADML2A6NDP7 307 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 KIAA0355O15063 1070 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 ADCY6O43306 1168 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 PQBP1O60828 265 aaKnown RBP21.85■■□□□ 1.09
CLN6-220ENST00000637450 FGAP02671 866 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 CST5P28325 142 aaPredicted RBP21.85■■□□□ 1.09
CLN6-220ENST00000637450 CCDC144CPQ8IYA2 1237 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 KATNBL1Q9H079 304 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 A1CFQ9NQ94 594 aaKnown RBP21.85■■□□□ 1.09
CLN6-220ENST00000637450 RNF146Q9NTX7 359 aa21.85■■□□□ 1.09
CLN6-220ENST00000637450 A0A0D9SFI3 127 aa21.84■■□□□ 1.09
CLN6-220ENST00000637450 GJA9P57773 515 aa21.84■■□□□ 1.09
CLN6-220ENST00000637450 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
CLN6-220ENST00000637450 UPF3AQ9H1J1 476 aaKnown RBP21.84■■□□□ 1.09
CLN6-220ENST00000637450 PRR12Q9ULL5 1215 aa21.84■■□□□ 1.09
CLN6-220ENST00000637450 LTBP2Q14767 1821 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 SOWAHBA6NEL2 793 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 C6orf222P0C671 652 aaPredicted RBP21.83■■□□□ 1.09
CLN6-220ENST00000637450 ALAS1P13196 640 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 SNAP25P60880 206 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 IRX5P78411 483 aaPredicted RBP21.83■■□□□ 1.09
CLN6-220ENST00000637450 FAAP100Q0VG06 881 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 AAMPQ13685 434 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 CCDC174Q6PII3 467 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 RASGRP2Q7LDG7 609 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 PCSK9Q8NBP7 692 aaKnown RBP21.83■■□□□ 1.09
CLN6-220ENST00000637450 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 TMEM39AQ9NV64 488 aa21.83■■□□□ 1.09
CLN6-220ENST00000637450 ELP1O95163 1332 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 DCDC2CA8MYV0 355 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 HSPD1P10809 573 aaKnown RBP21.82■■□□□ 1.08
CLN6-220ENST00000637450 RAG1P15918 1043 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 DCAF4Q8WV16 495 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 GLT1D1Q96MS3 346 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 TCP11L1Q9NUJ3 509 aa21.82■■□□□ 1.08
CLN6-220ENST00000637450 ASB14A6NK59 587 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 ASGR1P07306 291 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 CDK7P50613 346 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 NKX3-2P78367 333 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 NMIQ13287 307 aaPredicted RBP21.81■■□□□ 1.08
CLN6-220ENST00000637450 MUM1L1Q5H9M0 696 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 GNASQ5JWF2 1037 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
CLN6-220ENST00000637450 GUCD1Q96NT3 240 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 LNPKQ9C0E8 428 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 TOMM22Q9NS69 142 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 MTMR7Q9Y216 660 aa21.81■■□□□ 1.08
CLN6-220ENST00000637450 CTAGE5O15320 804 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 EPHB4P54760 987 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
CLN6-220ENST00000637450 BTNL9Q6UXG8 535 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 SMC5Q8IY18 1101 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 CYP39A1Q9NYL5 469 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
CLN6-220ENST00000637450 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.79■■□□□ 1.08
CLN6-220ENST00000637450 TRIM6-TRIM34B2RNG4 842 aa21.79■■□□□ 1.08
CLN6-220ENST00000637450 ICAM1P05362 532 aa21.79■■□□□ 1.08
CLN6-220ENST00000637450 TOP1P11387 765 aaKnown RBP21.79■■□□□ 1.08
CLN6-220ENST00000637450 SMAD3P84022 425 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms