RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
CLN5-218ENST00000637397 SLC1A4P43007 532 aa17.53■□□□□ 0.4
CLN5-218ENST00000637397 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
CLN5-218ENST00000637397 KRT12Q99456 494 aa17.53■□□□□ 0.4
CLN5-218ENST00000637397 NT5C3AQ9H0P0 336 aa17.53■□□□□ 0.4
CLN5-218ENST00000637397 SERPINA10Q9UK55 444 aa17.53■□□□□ 0.4
CLN5-218ENST00000637397 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
CLN5-218ENST00000637397 GPBP1Q86WP2 473 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 P2RX5Q93086 422 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 AMFRQ9UKV5 643 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 PCDHA12Q9UN75 941 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 KRT5P13647 590 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
CLN5-218ENST00000637397 MYCT1Q8N699 235 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 RDH13Q8NBN7 331 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 DPF2Q92785 391 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 IMPG2Q9BZV3 1241 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
CLN5-218ENST00000637397 BUB1BO60566 1050 aaPredicted RBP17.52■□□□□ 0.39
CLN5-218ENST00000637397 EXOC3O60645 756 aa17.52■□□□□ 0.39
CLN5-218ENST00000637397 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.39
CLN5-218ENST00000637397 ADAT2Q7Z6V5 191 aaKnown RBP17.52■□□□□ 0.39
CLN5-218ENST00000637397 STRBPQ96SI9 672 aaKnown RBP17.52■□□□□ 0.39
CLN5-218ENST00000637397 ARMCX3Q9UH62 379 aaPredicted RBP17.52■□□□□ 0.39
CLN5-218ENST00000637397 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.39
CLN5-218ENST00000637397 ATP5DP30049 168 aa17.52■□□□□ 0.39
CLN5-218ENST00000637397 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.39
CLN5-218ENST00000637397 FOXN1O15353 648 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 GNA14O95837 355 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 STAT1P42224 750 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 WDR78Q5VTH9 848 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 MB21D2Q8IYB1 491 aaPredicted RBP17.51■□□□□ 0.39
CLN5-218ENST00000637397 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
CLN5-218ENST00000637397 EPB41L5Q9HCM4 733 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 KIF28PB7ZC32 967 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 FAM26FQ5R3K3 315 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 DENND2CQ68D51 928 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 ZNF365Q70YC5 407 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 MYO1CO00159 1063 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 ZNF710Q8N1W2 664 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 RAB17Q9H0T7 212 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 ZSCAN20P17040 1043 aaPredicted RBP17.51■□□□□ 0.39
CLN5-218ENST00000637397 ALDH3A1P30838 453 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 WDR24Q96S15 920 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 GDAQ9Y2T3 454 aa17.51■□□□□ 0.39
CLN5-218ENST00000637397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN5-218ENST00000637397 RGS16O15492 202 aaPredicted RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 TEX33O43247 280 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 CDC27P30260 824 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 MRPS25P82663 173 aaKnown RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 TAOK1Q7L7X3 1001 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 TRIM7Q9C029 511 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 NHEJ1Q9H9Q4 299 aaPredicted RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 REREQ9P2R6 1566 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 EPHB4P54760 987 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 USH1GQ495M9 461 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 TCP11X2Q5H9J9 407 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 MGARPQ8TDB4 240 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 RASGRF1Q13972 1273 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 UHMK1Q8TAS1 419 aaKnown RBP17.5■□□□□ 0.39
CLN5-218ENST00000637397 GLT8D2Q9H1C3 349 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 PANK4Q9NVE7 773 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 ZBED6P86452 979 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 ADAM9Q13443 819 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 NAA35Q5VZE5 725 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 GALNT17Q6IS24 598 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 VSIG1Q86XK7 387 aa17.5■□□□□ 0.39
CLN5-218ENST00000637397 ATP11AP98196 1134 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 SP4Q02446 784 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 CTIFO43310 598 aaKnown RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 MOCS3O95396 460 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 SLC7A5Q01650 507 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 LRRC41Q15345 812 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLN5-218ENST00000637397 IRX2Q9BZI1 471 aaPredicted RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 ARHGEF35A5YM69 484 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 JRKLQ9Y4A0 524 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 SRGAP2O75044 1071 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 PCP11498 1178 aaKnown RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 EXOSC10Q01780 885 aaKnown RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 GKAP1Q5VSY0 366 aaPredicted RBP17.49■□□□□ 0.39
CLN5-218ENST00000637397 CROCCP2Q86T23 111 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 FAM212AQ96EL1 285 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms