RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PLIN4Q96Q06 1357 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 PLXNA1Q9UIW2 1896 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 TSPY3P0CV98 308 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 TSPY8P0CW00 308 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 BMP3P12645 472 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 ACLYP53396 1101 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 BECN1Q14457 450 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 ANKRD33Q7Z3H0 272 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 LENG1Q96BZ8 264 aaPredicted RBP14.92□□□□□ -0.02
CTSD-208ENST00000636843 NAPBQ9H115 298 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 ABHD16BQ9H3Z7 469 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.92□□□□□ -0.02
CTSD-208ENST00000636843 ZHX1Q9UKY1 873 aaPredicted RBP14.92□□□□□ -0.02
CTSD-208ENST00000636843 DCDC2CA8MYV0 355 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
CTSD-208ENST00000636843 RAG1P15918 1043 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 ITGB8P26012 769 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 CST5P28325 142 aaPredicted RBP14.91□□□□□ -0.02
CTSD-208ENST00000636843 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 CCSAPQ6IQ19 270 aaPredicted RBP14.91□□□□□ -0.02
CTSD-208ENST00000636843 PLEKHM2Q8IWE5 1019 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
CTSD-208ENST00000636843 PI4K2BQ8TCG2 481 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 FAM161BQ96MY7 647 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
CTSD-208ENST00000636843 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 SPC25Q9HBM1 224 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 STARD7Q9NQZ5 370 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 TMEM39AQ9NV64 488 aa14.91□□□□□ -0.02
CTSD-208ENST00000636843 TMEM232C9JQI7 657 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 STAT2P52630 851 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 TFAP4Q01664 338 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 PPARAQ07869 468 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 KCNA10Q16322 511 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 FAM160B2Q86V87 743 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 PCSK9Q8NBP7 692 aaKnown RBP14.9□□□□□ -0.02
CTSD-208ENST00000636843 SEMA6BQ9H3T3 888 aa14.9□□□□□ -0.02
CTSD-208ENST00000636843 LAMA2P24043 3122 aaKnown RBP14.9□□□□□ -0.02
CTSD-208ENST00000636843 ELP1O95163 1332 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 PLA2G6O60733 806 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 FAAP100Q0VG06 881 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 STAG1Q8WVM7 1258 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 GMCL1Q96IK5 515 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
CTSD-208ENST00000636843 FGD4Q96M96 766 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 UPF3AQ9H1J1 476 aaKnown RBP14.89□□□□□ -0.03
CTSD-208ENST00000636843 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
CTSD-208ENST00000636843 MROH7Q68CQ1 1323 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 TMEM265A0A087WTH1 108 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 C6orf222P0C671 652 aaPredicted RBP14.88□□□□□ -0.03
CTSD-208ENST00000636843 MFAP1P55081 439 aaKnown RBP14.88□□□□□ -0.03
CTSD-208ENST00000636843 GJA9P57773 515 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 FPGSQ05932 587 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 TKFCQ3LXA3 575 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 ARMCX2Q7L311 632 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 GLT1D1Q96MS3 346 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 CDX2Q99626 313 aaPredicted RBP14.88□□□□□ -0.03
CTSD-208ENST00000636843 ACAD9Q9H845 621 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
CTSD-208ENST00000636843 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
CTSD-208ENST00000636843 MX1P20591 662 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 SLC1A4P43007 532 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 CDK7P50613 346 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
CTSD-208ENST00000636843 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.87□□□□□ -0.03
CTSD-208ENST00000636843 FAM133AQ8N9E0 248 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
CTSD-208ENST00000636843 HOMER2Q9NSB8 354 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 MYADML2A6NDP7 307 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 CDC45O75419 566 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 TIMP1P01033 207 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 ASGR1P07306 291 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 MCCP23508 829 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 EPHB4P54760 987 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 NKX3-2P78367 333 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 CCDC144CPQ8IYA2 1237 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 VTI1AQ96AJ9 217 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 RNF146Q9NTX7 359 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 TBX21Q9UL17 535 aa14.87□□□□□ -0.03
CTSD-208ENST00000636843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
CTSD-208ENST00000636843 ASB14A6NK59 587 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 ADCY6O43306 1168 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 CNTN2Q02246 1040 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 GNASQ5JWF2 1037 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 TRERF1Q96PN7 1200 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 TTYH1Q9H313 450 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms