RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 USP37Q86T82 979 aa18.1■□□□□ 0.49
CLCN2-215ENST00000636661 DHX40Q8IX18 779 aaKnown RBP18.1■□□□□ 0.49
CLCN2-215ENST00000636661 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
CLCN2-215ENST00000636661 FAM26FQ5R3K3 315 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 RESP18Q5W5W9 173 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 KCTD16Q68DU8 428 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 COA7Q96BR5 231 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 MTRF1LQ9UGC7 380 aaKnown RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 PRDX5P30044 214 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 ACTN2P35609 894 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 SLC16A2P36021 539 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 CYP2J2P51589 502 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 EHHADHQ08426 723 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 NAA35Q5VZE5 725 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 TEX33O43247 280 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 PNMA6AP0CW24 399 aaPredicted RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 IQCB1Q15051 598 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 TSGA10IPQ3SY00 556 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
CLCN2-215ENST00000636661 GJA10Q969M2 543 aa18.09■□□□□ 0.49
CLCN2-215ENST00000636661 PAK2Q13177 524 aa18.08■□□□□ 0.49
CLCN2-215ENST00000636661 KMT5BQ4FZB7 885 aa18.08■□□□□ 0.49
CLCN2-215ENST00000636661 TBCKQ8TEA7 893 aa18.08■□□□□ 0.49
CLCN2-215ENST00000636661 IKBKGQ9Y6K9 419 aa18.08■□□□□ 0.49
CLCN2-215ENST00000636661 FLOT1O75955 427 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 KRT31Q15323 416 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 IRX2Q9BZI1 471 aaPredicted RBP18.08■□□□□ 0.48
CLCN2-215ENST00000636661 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
CLCN2-215ENST00000636661 UBN2Q6ZU65 1347 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 PHLPP2Q6ZVD8 1323 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 ARMCX5Q6P1M9 558 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 MYO1AQ9UBC5 1043 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 ARMCX3Q9UH62 379 aaPredicted RBP18.08■□□□□ 0.48
CLCN2-215ENST00000636661 KIAA1024Q9UPX6 916 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 FAN1Q9Y2M0 1017 aa18.08■□□□□ 0.48
CLCN2-215ENST00000636661 MYCLP12524 364 aaPredicted RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 MECOMQ03112 1051 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 CUL4BQ13620 913 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 KRT71Q3SY84 523 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 UHMK1Q8TAS1 419 aaKnown RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PPANQ9NQ55 473 aaKnown RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 TRIM49BA6NDI0 452 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 NEBLO76041 1014 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 XRCC5P13010 732 aaKnown RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PPFIA1Q13136 1202 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PIGSQ96S52 555 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 CCDC77Q9BR77 488 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 IMPG2Q9BZV3 1241 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PANK4Q9NVE7 773 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 MTUS1Q9ULD2 1270 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PCDHA4Q9UN74 947 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 INPP5BP32019 993 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 ADAM9Q13443 819 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 LLGL1Q15334 1064 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 ANKS4BQ8N8V4 417 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 NCOA3Q9Y6Q9 1424 aa18.07■□□□□ 0.48
CLCN2-215ENST00000636661 CALUO43852 315 aaPredicted RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 RABL6Q3YEC7 729 aaPredicted RBP18.07■□□□□ 0.48
CLCN2-215ENST00000636661 PRPF3O43395 683 aaKnown RBP18.06■□□□□ 0.48
CLCN2-215ENST00000636661 HYOU1Q9Y4L1 999 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 PCDHA1Q9Y5I3 950 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 GNGT1P63211 74 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 PABPC4Q13310 644 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLCN2-215ENST00000636661 SEL1L2Q5TEA6 688 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 NSMFQ6X4W1 530 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 SENP2Q9HC62 589 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
CLCN2-215ENST00000636661 GUCY2DQ02846 1103 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 MTF1Q14872 753 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 SPICE1Q8N0Z3 855 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 BCAS4Q8TDM0 211 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 P2RX5Q93086 422 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 FAM204AQ9H8W3 233 aa18.06■□□□□ 0.48
CLCN2-215ENST00000636661 UTP11Q9Y3A2 253 aaKnown RBP18.06■□□□□ 0.48
CLCN2-215ENST00000636661 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
CLCN2-215ENST00000636661 FAM205CA6NFA0 338 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 PLCG1P19174 1290 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 ZNF658Q5TYW1 1059 aaPredicted RBP18.05■□□□□ 0.48
CLCN2-215ENST00000636661 SMIM5Q71RC9 77 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 ENAHQ8N8S7 591 aaPredicted RBP18.05■□□□□ 0.48
CLCN2-215ENST00000636661 KIFC2Q96AC6 838 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 NAP1L4Q99733 375 aaKnown RBP18.05■□□□□ 0.48
CLCN2-215ENST00000636661 NT5C3AQ9H0P0 336 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 ANKRD65E5RJM6 399 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 TRAPPC10P48553 1259 aa18.05■□□□□ 0.48
CLCN2-215ENST00000636661 KCTD1Q719H9 257 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms