RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ALS2CLQ60I27 953 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 TMTC3Q6ZXV5 915 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 SH3GL2Q99962 352 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 TTYH3Q9C0H2 523 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 SNX12Q9UMY4 172 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MAPK8IP1Q9UQF2 711 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 FAM169AQ9Y6X4 670 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MYH3P11055 1940 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 NUTM2BA6NNL0 878 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 NUTM2EB1AL46 878 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 PDE2AO00408 941 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 TACC1O75410 805 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 NLRP5P59047 1200 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MCTP2Q6DN12 878 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 FAM114A1Q8IWE2 563 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 BCAS4Q8TDM0 211 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 LACRTQ9GZZ8 138 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 LRP5O75197 1615 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MCM7P33993 719 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 TROAPQ12815 778 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 HLFQ16534 295 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 FIGNQ5HY92 759 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 EMBQ6PCB8 327 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 DHTKD1Q96HY7 919 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 ATF3P18847 181 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 EPHB4P54760 987 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 C2orf54Q08AI8 447 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 IL17AQ16552 155 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-220ENST00000635988 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 ZNF185O15231 689 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 PPP1R2P41236 205 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 SPATS2Q86XZ4 545 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 GSPT2Q8IYD1 628 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 TUBGCP2Q9BSJ2 902 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 DISC1Q9NRI5 854 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 RCCD1A6NED2 376 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 RHOBTB3O94955 611 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 SCG2P13521 617 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 IL2RBP14784 551 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 TCP1P17987 556 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 CALML3P27482 149 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 GNGT1P63211 74 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 SKOR1P84550 965 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 TBC1D8BQ0IIM8 1120 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 B4GALNT4Q76KP1 1039 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 CREG2Q8IUH2 290 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 DRC1Q96MC2 740 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 NCAPGQ9BPX3 1015 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 CNTNAP5Q8WYK1 1306 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
CACNA1A-220ENST00000635988 B4DLN1 442 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 CYP7A1P22680 504 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 TTI2Q6NXR4 508 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 CCDC47Q96A33 483 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 CCDC42Q96M95 316 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 PLCH1Q4KWH8 1693 aa16.52■□□□□ 0.24
CACNA1A-220ENST00000635988 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.23
CACNA1A-220ENST00000635988 HSF2BPO75031 334 aa16.52■□□□□ 0.23
CACNA1A-220ENST00000635988 CLSTN1O94985 981 aa16.52■□□□□ 0.23
CACNA1A-220ENST00000635988 TNFRSF8P28908 595 aa16.52■□□□□ 0.23
CACNA1A-220ENST00000635988 MYCBPQ99417 103 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-220ENST00000635988 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 INPP5BP32019 993 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 NNTQ13423 1086 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 SKIDA1Q1XH10 827 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 CCDC91Q7Z6B0 441 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 CSGALNACT2Q8N6G5 542 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 CAVIN3Q969G5 261 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 ALS2CR12Q96Q35 445 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 LIG3P49916 1009 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 APBA1Q02410 837 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms