RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 IGF2RP11717 2491 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ZNFX1Q9P2E3 1918 aaKnown RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 SCN5AQ14524 2016 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 LDHBP07195 334 aaKnown RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 HSPA5P11021 654 aaKnown RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 FCER1AP12319 257 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 KCNJ6P48051 423 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 WDR5P61964 334 aaKnown RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 ZNF792Q3KQV3 632 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 TMCO2Q7Z6W1 182 aaPredicted RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 HINFPQ9BQA5 517 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 PHF7Q9BWX1 381 aaPredicted RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 PUS3Q9BZE2 481 aaKnown RBP7.58□□□□□ -1.2
LINC00649-220ENST00000628906 SIL1Q9H173 461 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 ANGPTL2Q9UKU9 493 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
LINC00649-220ENST00000628906 LOC400499M0QZD8 3231 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 KIF16BQ96L93 1317 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 PTPRSQ13332 1948 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 ADCY6O43306 1168 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 TBX10O75333 385 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 SNAI1O95863 264 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 IQCF3P0C7M6 154 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 SUPT20HL2P0C7V6 817 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 ZEB1P37275 1124 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 SHC2P98077 582 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 HYAL1Q12794 435 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 ADAM15Q13444 863 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 EPC2Q52LR7 807 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 ZGPATQ8N5A5 531 aaKnown RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 MSL3Q8N5Y2 521 aaKnown RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 SAMD11Q96NU1 681 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 PNNQ9H307 717 aaKnown RBP7.57□□□□□ -1.2
LINC00649-220ENST00000628906 HOXC10Q9NYD6 342 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 CHMP3Q9Y3E7 222 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 DMXL2Q8TDJ6 3036 aa7.57□□□□□ -1.2
LINC00649-220ENST00000628906 MROH5Q6ZUA9 1318 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 SALL1Q9NSC2 1324 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 PTPN13Q12923 2485 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 TAF4O00268 1085 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 CYP2C9P11712 490 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 VCAM1P19320 739 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 RHBDL3P58872 404 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 DEFB103AP81534 67 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 GPM6BQ13491 265 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 COG2Q14746 738 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 SHROOM1Q2M3G4 852 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 CXCL17Q6UXB2 119 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 CCDC105Q8IYK2 499 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 UBALD2Q8IYN6 164 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 SMRP1Q8NCR6 262 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 FTOQ9C0B1 505 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 ALDH8A1Q9H2A2 487 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 CDV3Q9UKY7 258 aaKnown RBP7.56□□□□□ -1.2
LINC00649-220ENST00000628906 ZMIZ1Q9ULJ6 1067 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 INSL6Q9Y581 213 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 R4GN57 208 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 LAMA5O15230 3695 aa7.56□□□□□ -1.2
LINC00649-220ENST00000628906 RALGAPA2Q2PPJ7 1873 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 MYO10Q9HD67 2058 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 PDE8BO95263 885 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 PGK2P07205 417 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 PPP2R1AP30153 589 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 USP14P54578 494 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 COASYQ13057 564 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 CNGB1Q14028 1251 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-220ENST00000628906 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 MAMDC4Q6UXC1 1216 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 NCAPG2Q86XI2 1143 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 MB21D1Q8N884 522 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 VGLL2Q8N8G2 317 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 SUMF1Q8NBK3 374 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 SP7Q8TDD2 431 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-220ENST00000628906 RPGRIP1Q96KN7 1286 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 KIAA1683Q9H0B3 1180 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 PI4KBQ9UBF8 816 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 ZBTB21Q9ULJ3 1066 aa7.55□□□□□ -1.2
LINC00649-220ENST00000628906 LAS1LQ9Y4W2 734 aaKnown RBP7.55□□□□□ -1.2
LINC00649-220ENST00000628906 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-220ENST00000628906 GPR75-ASB3A0A0A6YYF3 556 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 PI15O43692 258 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 MAP4K4O95819 1239 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 PMLP29590 882 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 BTDP43251 543 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 BEX3Q00994 111 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 LMNB2Q03252 620 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 RING1Q06587 406 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms