RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
SOX2-OT-245ENST00000628211 ADCY3O60266 1144 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 HMGCRP04035 888 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 ICAM1P05362 532 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 GNAQP50148 359 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 FGD1P98174 961 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 GRM4Q14833 912 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 MMP19Q99542 508 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 TM6SF1Q9BZW5 370 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 ACAD9Q9H845 621 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 GJD2Q9UKL4 321 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
SOX2-OT-245ENST00000628211 HTTP42858 3142 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 PFASO15067 1338 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 SOX10P56693 466 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 EXOSC10Q01780 885 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 TROAPQ12815 778 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 PPP2R5BQ15173 497 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 POTEHQ6S545 545 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 DPP9Q86TI2 863 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 USP6NLQ92738 828 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 ZNF333Q96JL9 665 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
SOX2-OT-245ENST00000628211 KIAA0100Q14667 2235 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 PALM3A6NDB9 673 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 PEX10O60683 326 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 CASTP20810 708 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 ADORA2AP29274 412 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 OLFML2BQ68BL8 750 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 RBM28Q9NW13 759 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 BAZ2BQ9UIF8 2168 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-245ENST00000628211 ZNF536O15090 1300 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 GOLGA8HP0CJ92 632 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 CYP2B6P20813 491 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 SLC16A2P36021 539 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 MFSD14CQ5VZR4 134 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 MSL3Q8N5Y2 521 aaKnown RBP12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 SPZ1Q9BXG8 430 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
SOX2-OT-245ENST00000628211 ABCB11O95342 1321 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 CCDC196A0A1B0GTZ2 297 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 INHAP05111 366 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 ALAS1P13196 640 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 ADGRF4Q8IZF3 695 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 MPHOSPH6Q99547 160 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 AMNQ9BXJ7 453 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 NRBP1Q9UHY1 535 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
SOX2-OT-245ENST00000628211 ZBTB5O15062 677 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 ZBTB43O43298 467 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 IL27Q8NEV9 243 aa12.42□□□□□ -0.42
SOX2-OT-245ENST00000628211 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms