RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 SOWAHBA6NEL2 793 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 CTAGE5O15320 804 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 ORC4O43929 436 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 AKR1A1P14550 325 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 OAZ1P54368 228 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 TLE2Q04725 743 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
SOX2-OT-241ENST00000626948 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 SLC1A4P43007 532 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 STAT2P52630 851 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 EPHB4P54760 987 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 SHHQ15465 462 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 B4GALNT3Q6L9W6 998 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 ARMCX2Q7L311 632 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 BADQ92934 168 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 MTMR10Q9NXD2 777 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
SOX2-OT-241ENST00000626948 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 RANBP6O60518 1105 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 PLA2G6O60733 806 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 SLC3A2P08195 630 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
SOX2-OT-241ENST00000626948 ACLYP53396 1101 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 HAND2P61296 217 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 KCNA10Q16322 511 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 RNF180Q86T96 592 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 FAM160B2Q86V87 743 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 MTMR7Q9Y216 660 aa16.02■□□□□ 0.16
SOX2-OT-241ENST00000626948 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 SDSP20132 328 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 SLC16A2P36021 539 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 NUCB1Q02818 461 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 TRERF1Q96PN7 1200 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 IL25Q9H293 177 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 OSBPL3Q9H4L5 887 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 PRUNE2Q8WUY3 3088 aa16.01■□□□□ 0.15
SOX2-OT-241ENST00000626948 NEDD4P46934 1319 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 FDX1P10109 184 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 ALAS1P13196 640 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 CST5P28325 142 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-241ENST00000626948 GJA9P57773 515 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 BTNL9Q6UXG8 535 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 GUCD1Q96NT3 240 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
SOX2-OT-241ENST00000626948 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
SOX2-OT-241ENST00000626948 ABHD16BQ9H3Z7 469 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-241ENST00000626948 LAMA4Q16363 1823 aa16■□□□□ 0.15
SOX2-OT-241ENST00000626948 FRMPD2Q68DX3 1309 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 PQBP1O60828 265 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 CLTBP09497 229 aa15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 CDK7P50613 346 aa15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 NKX3-2P78367 333 aa15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-241ENST00000626948 ANKRD33Q7Z3H0 272 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms